Daphnia pulex (common water flea): DAPPUDRAFT_347345
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Entry
DAPPUDRAFT_347345 CDS
T04347
Name
(GenBank) putative SMC4, structural maintenance of chromosome protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_347345
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
DAPPUDRAFT_347345
Condensin II
DAPPUDRAFT_347345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
CotJB
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
EFX66580
JGI:
Dappu1_347345
UniProt:
E9HNW2
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MPPGKNRLEGNEDHVVDKRQKKTHEPASDTLKDPDADVVDEGGEDEDGEDRNEGGMYFGD
IYIPPAPAPSLTMDASGPRLVITHIENFYFKSYAGKQVLGPFHKSFTSIIGPNGSGKSNV
IDSMLFVFGYRANKIRSKSVAVLIHNSENHPNVQSCSVAVHFQMIEDINDDEFNVVPGSQ
FVVSRTAFKDNSSFYQINGKRVQFKHVAKLLRNQGIDLDHNRFLILQGEVEQIAMMKPKA
PNEHEGGMLEFLEDIMGTSRYKQPTEELSQRVESLNTLRTEKLNRVKLVEKEKDELEGPK
NEAVAYIKLENDLAQFKYNLQQLYTHQSLKVIADSEQKKEKVNEEMGDLKTRLEELTLFK
SQKDKDLKQCSKEHEEANRKLEKSVEKVASLIKDDEKMVEDYRLINTSRKKAKETIVSEK
AKFEELSKIPEKNTKEIAELEKVLVDLEKKKEKEEKHFNEIMSNLQTETQGLQDEKQQHE
LELVQLKKAVNETQAQMDVAQSELDIYLSTEKKEKNVLDSMKEQLEKASQNYTERHRNLQ
ELESNNPKWAKSLSEKQTELQKVTNEDKSKSEELRNIRIRLEQSRSTFSANTSRGRILDG
LMEQKRKGTLPGIYGRLGDLGAIDEKFDGAVSTACGPLDNIVVDTVDTAQKCIAYLKNGN
LGRASFIALEKMHHLIDVARQPFDAPESVPRLYDLIRVKDERVKPAFYSGLRNTLVAENL
EQATRIGYGSRTRHRIVTLKGELIEPSGTMSGGGNGCQRGRMGRNVTTDTSGNETSAKDI
ALMEEKMQQLTEQCSQLRQKKQTLEDELVELNKLTRDGTTNLQKWKMEIRASEEQQKTLK
EQINIQEKKVADSMADKKQVKAMEMSIAEKRKAYDAATETASKIQSKVQKVHSQIMELTE
GKMSKAREKLDAFTSQISKVSSEKTKLGVAIKTSERNAKKSEDKIATLEQEVKDAEDDLR
KLQERRKEIEEEAMNLKSSQQTLEATEKEMNTKLVNLKSERDAALKEENKVRAEKIDYDQ
KMEKFDEAIASHRAKVEHWKREMSKIKLTAVDGNPAPEIKQIAEEELDGIRVDTFQNQIT
KTEAELGKMSPNLQAIADYRKKEEIYLARVAELDEVTQQRDKQRKHVDGLRKARLSEFMT
GFAIITTKLKELYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKTWKNISNLSGGEKT
LSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVGNYIKERTRNAQFIIISLRSNMFE
LADRLVGIYKTHNTTKSVAINPNTIEKRGETENTNPASNSNTNVTAVSNVTVA
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgccacctggaaaaaataggttggaaggtaatgaggatcatgttgtggataagcgtcag
aagaaaacacacgaacctgcttctgacactttaaaggatccagatgctgatgttgtcgat
gaaggtggtgaagatgaagatggtgaagatcgaaatgagggtggaatgtactttggggat
atttacatccccccagcgccagccccatctcttacaatggatgccagtggcccaagatta
gttatcacccacattgaaaacttctacttcaaaagttatgctgggaaacaagtgttgggt
ccatttcacaagagtttcacttccatcattggtcctaatggcagtgggaaaagcaatgtc
attgattccatgctgtttgtcttcggttatcgtgccaacaaaattcgatccaaaagtgta
gcagtccttatccataattctgaaaaccatccaaatgtacaaagttgctcagtagctgtc
cactttcagatgattgaagatattaatgatgatgaatttaatgtggttcctgggtcacaa
tttgttgtctctagaacagctttcaaggataattcgtcattttatcaaatcaatggaaaa
cgagtccagtttaaacatgtcgccaaacttttgagaaatcaaggtattgatcttgatcac
aacagatttctcatcttacaaggagaagtagagcagattgccatgatgaaaccaaaagcc
cccaatgagcatgaaggtggcatgcttgaatttttagaagacatcatgggaacttcaagg
tacaaacagccgaccgaggaactcagtcaaagagtagaatcgctaaacaccctaagaact
gaaaagcttaatcgcgttaagctggtggagaaagaaaaggacgaacttgagggcccgaag
aacgaagcagtggcttatatcaagttggaaaatgatctcgcacagtttaaatataatctc
cagcaactctacactcatcaatccttgaaagtgatcgccgacagtgaacaaaagaaagaa
aaggtgaacgaagaaatgggcgatttgaagactagactagaggaactgactttgttcaaa
tcccaaaaggataaggatttaaagcaatgctccaaagagcacgaagaagccaaccggaag
ctagagaaatccgtggaaaaagtggctagtttgatcaaagatgacgagaagatggttgaa
gactaccgtctcatcaacacgagccgcaaaaaagccaaagaaaccatcgtgagcgagaag
gccaagtttgaagagttgagcaaaattcccgaaaaaaatacaaaagaaattgcagaatta
gagaaagtgctggtggatttggagaagaagaaggaaaaagaagaaaaacacttcaacgag
attatgtcaaatttgcaaacggaaacgcagggacttcaagacgagaagcaacaacatgaa
ctggaactggttcaactcaagaaagctgtaaatgaaacgcaagctcagatggacgttgcc
cagtccgagttggatatttacctcagcacagaaaagaaagaaaaaaatgtcctcgactct
atgaaggagcaacttgaaaaagcatcgcaaaattacacggaacgtcatcgtaatcttcaa
gaacttgaatccaacaatcccaagtgggcaaagtccctttcggaaaaacagactgaattg
caaaaggtcactaacgaggataaatcgaaaagcgaagaactcaggaatatacgcatccga
ctggagcaaagccgatcgactttttctgccaacactagccgaggacgcatccttgacggt
ttaatggagcagaaacgaaaaggaacgttacccggcatatatggacgcctgggtgatctc
ggcgctattgatgagaagttcgacggggccgtctcgacagcgtgtggccctttagataac
atcgtcgtcgataccgttgataccgcccaaaaatgcatcgcgtacctgaaaaacggaaac
ttgggcagagcttcttttatcgcactggagaaaatgcatcacttgatcgacgtcgcccgg
caaccgtttgacgctcccgagagcgtcccacgactttacgacctgatccgcgtcaaagac
gagcgagtcaaacctgccttttatagcggtctgagaaacacgctggtggcagaaaatctg
gaacaggcgactcgcatcggctatggttctcgtacccgacaccgcattgtcacgttgaaa
ggtgagttgattgagccatctggaaccatgagtggaggaggtaatggatgtcagcgcgga
agaatgggccggaatgtcactacagacacttcgggcaacgagacctctgccaaagatatt
gccttgatggaagaaaagatgcagcaacttaccgaacagtgcagccaactgcgtcagaag
aaacagacccttgaagatgagttggttgaacttaacaaattaacccgggatggaacgacc
aaccttcagaagtggaaaatggaaattagggcttccgaggaacaacaaaagactctaaag
gagcagattaacatccaagagaagaaagtggctgattcgatggcggataagaagcaggtt
aaggcaatggagatgtccatcgccgaaaaacgtaaagcatacgatgccgctacggaaacg
gcatccaaaatacagtccaaagttcaaaaagtccacagtcaaatcatggaattgacagag
ggtaaaatgagtaaagcaagggaaaaattagatgctttcacttcccagatatccaaagta
agctcggaaaaaacaaaacttggtgtggcaatcaaaacttcggagcgcaatgccaaaaag
tcggaagacaaaatcgccactctggaacaggaggtgaaagatgctgaggacgatttacgg
aagttgcaagaacgccgtaaggagatcgaagaggaggccatgaatctcaaatcttctcaa
caaacactagaggcaaccgaaaaagagatgaataccaaattggttaacctcaaatccgaa
cgtgatgcagctctcaaggaggagaacaaagttcgagctgagaagatcgactacgaccag
aaaatggaaaagtttgacgaagcgatcgcatctcatcgagccaaagttgagcactggaag
agagaaatgagcaaaatcaaactaaccgcagtagatgggaatccggcgccagaaatcaag
caaatcgcggaggaagaattagatggaatccgagtggatacgtttcagaatcagataacc
aaaacggaggcagaattaggcaaaatgtctccgaatttgcaggctattgcggattacaga
aagaaagaagaaatctacttagcgcgagttgccgaactggacgaggtcactcaacagcgc
gacaaacagcgaaaacatgtcgacggtctgcgcaaagccagactgagcgagtttatgact
ggattcgccatcatcaccaccaaattgaaagaactctaccaaatgattacgctgggaggt
gatgctgagctggaattagtcgattcgcttgatccattcagcgagggcatcgtctttagc
gtcagaccaccgaaaaagacgtggaagaatatttccaatctatctggaggcgagaaaact
ctctcttcgctggccctcgtctttgctcttcactattacaagccaacaccactgtacgtc
atggacgagattgatgccgccctcgatttcaaaaacgtctccattgttggaaactacatc
aaggagcggactcgcaacgcccagttcatcatcatttccctgcgttccaacatgttcgag
cttgccgatcgattggttggcatctacaagactcacaacaccaccaaatccgtagcgata
aaccccaataccattgagaagcgtggcgaaacagagaacaccaatcctgcttcaaattcc
aatactaatgttactgctgtttcaaacgtgaccgtagcttag
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