Daphnia pulex (common water flea): DAPPUDRAFT_347564
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Entry
DAPPUDRAFT_347564 CDS
T04347
Name
(GenBank) putative hypoxia inducible factor-1 alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx04137
Mitophagy - animal
dpx04140
Autophagy - animal
dpx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
DAPPUDRAFT_347564
04137 Mitophagy - animal
DAPPUDRAFT_347564
04148 Efferocytosis
DAPPUDRAFT_347564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_347564
Transcription factors [BR:
dpx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
DAPPUDRAFT_347564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HLH
PP-binding_2
PAS_2
Motif
Other DBs
NCBI-ProteinID:
EFX84860
JGI:
Dappu1_347564
UniProt:
E9G615
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MATRAPKEKRRNSEKRKEKSREAARCRRSKESEIFTDMANLLPVPSSLSSQLDKASIMRL
TIAFLKAQSLLGNSVQELCSLWNDDKCSMADACWPQALGGMLLALSSEGDIIYLTENVTQ
QLGLPQVDLIGQSIYDYCHPCDHDELREVLSLRPDGELARSFFLRLKSTLTAKGRSNNNL
KAASYKVMNCSGRIVLATASSVRNSFSQEGAFNEDDDLATEDDLEVEKAVKSPTSHFLVM
VGDPIPHPSNIEMPLDSYTFLTKHTLDMKYTYVDEKIYEFLGYMPEDLEGHSAYQLHHAQ
DNESILKSYKTMFTKGQIQTPPYRFLARHGGYAWVQTQATLVYGNRDSRPQAVVCVHTCL
SEIEDGDQILFVSQAEASATGLVQRPLAAAPAPSRKMPNEWLPQNMTSKLFVPKTAEMDE
GFLIFDKLKGATILKEDPEDLTHLAPVAGDSCIPLDMPSIAFPSDLFDVEQLTPEFFDCL
PLTGFDIPLLIEPEELIEDDDNGAIEPADFSAPPVSIKKEDPFIFFDADQSASPLVNSSS
NLSSPVPSISSVKGDYDKEFPIESSPIPSFMDETFMGGCSVQSSISPIEDEEELDRRAPY
ISMNGSDDLPLFDPSELFSGLDLECLPMQKCDLDFGETDQSVLVKLLQQSDGLPKMAGPP
PTTFDSLPLLLKGTTNMAATSVYQAQKRSSMGPADDSNPKRMKAPTLKMPNSGPLATRVT
PLKPSRGATSSLMDLLTERPTGHSQQHLSNQTSSVLQNLLGQPLLKKQMMVQREHDYGGG
LDSSSDTGSDSDTKVRHPRAFSCLNTFPFDMDVSPCSSVSLDIDSTDFFDTLNLSAEFVA
TDGATE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgcgctccaaaggaaaagaggcggaactctgagaagcgcaaggagaaatcc
cgtgaagctgcacgctgtcgtaggagtaaagaatcggagatctttaccgatatggccaat
ctactccccgtacccagtagcctcagctctcaattggacaaggcttctatcatgaggctg
actattgcttttctcaaagcacagtctctccttggcaacagtgtccaagaactgtgcagt
ctgtggaatgatgacaaatgctcgatggctgatgcttgttggccccaagcactggggggc
atgttattggctctatcgtccgaaggggatatcatctacctgactgagaacgtaacccag
caactgggtcttccacaggtggatctgattggtcaaagcatttacgactattgccatcca
tgcgatcatgatgaacttcgcgaagtgctttcgctccgtcccgatggtgaattagcgcgc
tcctttttcctccgcctcaagtcgacattaacggctaaaggacggagtaataataacctg
aaagccgcctcttacaaagttatgaactgttcggggcgcattgttctggcgacggcgtca
agtgttcgaaacagcttttctcaagaaggagctttcaatgaagatgatgacctagcaact
gaagatgatttggaagtggaaaaggccgtcaagtctcctactagccattttttggtgatg
gtcggcgatccaatcccgcacccatccaacatcgaaatgccgttggacagctacactttt
ctcaccaaacacactttggacatgaagtacacttacgtcgatgaaaagatctacgaattt
ttgggttacatgccggaggatttagaaggccattcagcgtaccaattacatcatgcgcaa
gataatgaatccatactcaaaagttacaaaacgatgttcacgaaaggacagattcaaact
ccgccgtatcgatttttggcaagacacggaggttatgcttgggtgcagactcaagcaact
cttgtttacggcaatcgagattccagaccgcaagcagtggtgtgcgtgcatacttgtttg
agtgaaattgaggatggggatcaaatcctcttcgtcagtcaagctgaagcatcagccact
ggtctggtccagcgcccattggctgcggctcctgcgccatcacgaaagatgcccaacgag
tggctgccgcaaaatatgacatcaaagctatttgtacctaaaacggctgaaatggacgaa
ggtttcctcatcttcgacaaactcaaaggcgccactattttgaaagaggatcctgaggat
ttgacacatttggcccccgttgctggggacagttgcatcccattagacatgccgtcaatc
gctttccctagtgaccttttcgacgttgagcaactgacgcccgagtttttcgattgtctg
ccgctgacgggatttgatattcctttgctgattgaacccgaggaattaatcgaggacgat
gacaatggtgcaattgagccagcggacttttccgctcctccagtgtcaatcaaaaaagaa
gatccattcattttcttcgatgctgatcaatcggcttcccccctggtgaatagttcaagc
aacttgtcgtctcctgtgccatcaatctcatcggtcaagggggattacgacaaagaattc
ccgatagaatcttcgcctattccgtcgtttatggatgagacatttatgggtggatgttca
gtgcagagttcgatatctccgatcgaagacgaagaagagctggatcgaagagctccttac
atttccatgaatgggagcgacgatttgcccttgtttgatccatcggagttgtttagtggc
ttggatttggagtgtttaccgatgcagaaatgtgatttggattttggcgaaaccgatcaa
tctgttctcgtcaagctattacaacaaagcgacggtctgccaaagatggctggccctccg
ccaactacatttgactctctgccacttttattgaaaggcactacaaatatggcggctaca
tccgtgtatcaagctcagaagcgctctagtatgggccctgccgacgattcgaatccaaag
cgaatgaaagccccgactttgaagatgccaaacagtggacctctggctacccgagtaacc
ccattgaaaccgtcaaggggcgccacgtcgagcctaatggatttgttaaccgagaggcct
acgggccattcgcagcagcacttaagcaatcaaacgtccagcgttctccaaaacttactg
ggccagccattgctgaagaagcaaatgatggtgcagcgggaacacgattacggtggtgga
ctcgattcgtcaagtgacacggggagtgattcggacacgaaagtccgtcatccgagagcg
ttcagctgtttgaacactttcccttttgatatggatgtgtcgccgtgttcatcggtttcg
ctcgacattgactctaccgatttctttgacacgttaaatttgtccgccgaattcgttgct
acggacggtgcaaccgagtga
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