Daphnia pulex (common water flea): DAPPUDRAFT_39221
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Entry
DAPPUDRAFT_39221 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10140
DNA damage-binding protein 2
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03420
Nucleotide excision repair
dpx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DAPPUDRAFT_39221
09124 Replication and repair
03420 Nucleotide excision repair
DAPPUDRAFT_39221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_39221
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_39221
Ubiquitin system [BR:
dpx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
DAPPUDRAFT_39221
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
DAPPUDRAFT_39221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
RAB3GAP2_N
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WD40_like
Motif
Other DBs
NCBI-ProteinID:
EFX89970
JGI:
Dappu1_39221
UniProt:
E9FS50
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MQCVQHLKVFKTASPFDRRITSLVWHPKSLTTLAVGSKGGDIILWNHQHESHDVFIQGLG
AGGSIQAMKFDYNEDNHLYTCSIDGTFCRRNLRSNQVTVYLNTGEDCFNNWYTSFDVSFT
GGLLLAGDNKGYVNLLTKDGTPIWKQRLHKSKVHHIEFHTGTPWLFATSSGDNFVRLWDV
RNIKNTESALVELKHEKGGVNSAYFSPAHGTRLLITDQHSELKIFSGPLWNLETKILHPH
RHFQHISPIKADWHPLEDIVVVGRYPDPKFTGSQGMDTFNPGTEPRTVDFFDASDGELIC
QLEPVGQKGIMCLNRFDQLGNILASAHGAHILLWAPKYSETNIPSTSDICQSVQAPMRRP
LTMDNDNDLKKKKRNTSSRKQK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtgtgcaacacttgaaagtgtttaagactgcatctccttttgaccgtagaatt
acttccttagtatggcacccaaagtcactcaccactcttgcagttggttccaaaggagga
gatatcattctgtggaatcatcagcatgaatctcatgatgtcttcatacaaggattaggg
gcagggggatcaatacaagcaatgaaatttgattataatgaagataatcacctctacacc
tgctcaattgatggaacattttgtaggaggaacttaagaagtaaccaagttactgtttac
ttaaacaccggtgaagactgcttcaataattggtacacatcttttgatgtatccttcact
ggaggacttctgcttgctggagataataaaggatatgtaaatttgcttaccaaagacggg
actcctatatggaaacaacgtttacataaatcaaaagtgcaccacattgaattccacaca
ggaacgccttggctatttgccacatcgtccggcgataatttcgttcgcttgtgggatgtg
agaaatataaagaataccgaaagcgcgcttgtagaacttaagcatgaaaagggaggcgta
aattctgcgtatttcagcccagcacatggaacaaggctcttgattacagatcaacacagc
gaactgaaaattttttctggcccactttggaatttggaaacaaaaattctccatcctcac
cgacattttcaacacatttcgcctattaaagcagattggcacccattagaagacattgtt
gtagttggacgatatccagaccccaagttcacaggctcacaaggaatggatacatttaat
ccaggaactgaaccccgcactgtggattttttcgacgcatctgacggggagctgatttgc
cagcttgagccagttggacagaaagggatcatgtgcttaaatcggtttgatcaattgggt
aacatattagcatctgcacatggggcgcatattcttttatgggcaccgaaatactcggag
acaaacattccttccactagtgatatttgccaaagtgttcaggcaccaatgcgtcgtcct
cttacgatggataatgataatgatttaaagaagaaaaaaagaaacacttcatctcgaaaa
caaaaatag
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integrated database retrieval system
