Daphnia pulex (common water flea): DAPPUDRAFT_442
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Entry
DAPPUDRAFT_442 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DAPPUDRAFT_442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_442
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_442
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_442
Enzymes [BR:
dpx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DAPPUDRAFT_442
Messenger RNA biogenesis [BR:
dpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DAPPUDRAFT_442
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
RNase
DAPPUDRAFT_442
Prokaryotic type
rRNA processing factors
DAPPUDRAFT_442
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DAPPUDRAFT_442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
EFX86299
JGI:
Dappu1_442
UniProt:
E9G2K5
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
KTWTRCAPADLYYARDLDNPKLMRGTDKLKATIDQFRIKLLERGDKARTMQPKFDYPPRK
TRRHSTQCGGSCKDKSKKTCESDSSTSDSSSEEEDEVDLVLQELERKKQHPSRLHPELWF
NDPGEMNDGPLCRCSFKARRTGIRHGIYAGEKSSMICDRNSNNGDILHHYRVTISPPTNF
LLKRPTVIHHDGHEFIFEGFSLLSHYPLDKVPTCKVIRFNIEYTIVYIEEKVPDNFTIQE
LELFSHYLFHELLELVDFNLHAAGDMNGCPQFHILPRFVRDLPDHGKEMLSMNQVLQYLI
QQNVPVIDETELGYQLKLPQHDWQNMADFTKGMIVTKPGSKPCSLRVDQLDRDQLRMDVI
SYPEIVHFGIRPPQLSYAGNPEYQKAWRDYVKFRHLLANMPKPSFEDKRKLEAKENRLQE
MRLQNNMKRDVTVAVSSEGFYRTGIMCDVVQHGMLLPVLITHLRFHKSLDVLEDRIKYRF
KNRYLLQLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLIN
IMSRLGKKQETESSITHNERLEFLGDAVVEFLASIHLYHMFPDLEEGGLATYRAAIVQNQ
HLAQLAKNLQLDQFMLYAHGSDLCHDLELRHAMANCFEALMGALFLDGGINVADRVFSNT
LFMNEKDLLDVWVNYPSHPLQEQELGGDRKWIASFPLLQKMVEFEESIGIKFTHIRLLAR
AFTDRSIGFNNLTLGSNQRLEFLGDTVLQLIASEYLYKFFPEHHEGHLSLLRSSLVNNRT
QAVVCDDLGMTNYALYSSPKAELKTKDRADLLEAFLGALYVDKGLEDCQTFCQVCFFPRL
QDFILHQDWNDPKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTRVYSVAVYFRGIR
LASASGHSIQQAEMNAAKEALEKSKDLFPQLNHQKKVIA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
aaaacatggactcgttgtgcgcctgcagatctgtactatgctcgggatctggacaatccc
aaattgatgcgtggcaccgacaaattgaaagctactattgatcaatttcgcattaagctg
ctagagcgtggcgacaaagctcgtacaatgcagcccaaatttgattaccctccccgtaaa
acaaggagacacagtacgcagtgtggcggttcttgcaaggataaatccaaaaagacttgc
gagtccgattcaagtacttctgattcgtcttcagaggaggaggacgaagttgatctagtt
cttcaagaactggaacgaaagaaacagcatccgtcaagacttcaccctgaactgtggttc
aatgatccaggagaaatgaatgacggtcctttgtgccgctgcagtttcaaagcacgtcgg
actggtattcgacatggtatctacgcaggagaaaaatcgtctatgatatgtgaccggaat
tctaacaacggtgatattttgcatcactaccgagtgaccatttccccaccgacaaatttt
ctcttaaagagaccgaccgttattcatcatgatggacacgagttcatttttgaaggtttc
tcgcttttgtctcactacccactagataaagtgcctacctgcaaagtcattcgattcaac
attgaatatacaatcgtctacattgaagaaaaagtccccgataactttacaattcaagaa
cttgaattgtttagtcactatctattccacgagttacttgagttggtcgactttaacctc
catgcagctggagatatgaacggttgtccgcaatttcatatcctaccacgttttgtgaga
gacttacctgaccacggcaaagagatgctgtcgatgaaccaagtgctccagtatctaatc
caacagaacgttccagtgattgacgaaacagaattgggttatcaactaaaactaccccag
catgattggcagaatatggctgattttacaaaaggaatgattgtcacgaagccaggttcc
aagccgtgttccctcagggttgaccagcttgatcgcgaccaacttcggatggatgtcatc
agctacccggagattgtccattttggcataaggccacctcaactcagctacgcaggcaat
cccgagtatcaaaaagcatggcgagactacgttaaatttcgccacctgctagccaatatg
ccgaagccgtcatttgaagacaagcgcaaattagaggcaaaggagaacagactccaggaa
atgcgactccagaataatatgaagcgcgatgtaacggtcgctgtttctagtgaaggattt
taccgaaccggaattatgtgtgatgtcgtccaacacggaatgttactcccagtgctgatt
acgcacttacgcttccacaagtcactcgatgttcttgaagacaggatcaagtatcgtttc
aagaatcgatatttgcttcaattggctcttacccatccttcgtatcgtgaaaattttgga
actaacccggatcatgcccgcaactctttaaccaattgtggaatacgtcagccggaatat
ggtgatagacgcattcactacatgaacacacgaaaacgaggaatcaacacattaatcaac
atcatgtcccgccttggcaagaagcaggagacagaatctagtatcactcacaatgagcga
ctggaattcttgggtgatgctgtagttgaatttttggcttccatccatctgtatcacatg
tttcctgatttggaggagggtggtttggcaacctaccgagctgcaattgtccagaatcaa
catcttgcccaattagccaaaaaccttcaacttgaccagtttatgttatacgctcatgga
tcggatctgtgccacgacctggaattgcgacatgcgatggccaactgttttgaagcactg
atgggagcactcttcttggatggtggaataaatgtggctgatagggttttttccaacaca
ctcttcatgaacgaaaaagaccttttggacgtgtgggtcaattatccatcccatccattg
caagaacaagaattgggcggtgatcgtaaatggatcgcatcttttcctcttttgcaaaag
atggttgaatttgaagagtcgattggaatcaagtttacccatattcgacttcttgcccga
gctttcactgaccgcagtattggtttcaataatttaactttgggatctaatcagcgtttg
gagtttcttggtgacacagttctacagctgatagcatccgagtatctctacaaattcttt
ccggagcatcacgaggggcatttgtctttgctgcgaagttccctcgtcaacaaccggacc
caggcagttgtgtgtgatgatttaggaatgaccaattacgccctttattcgagccctaaa
gcggaattgaagacaaaagacagagcggatcttctagaagcctttttaggtgcactgtac
gtcgataaaggattggaagactgtcaaacattttgccaggtgtgtttctttcctcgcctg
caagactttatccttcatcaagactggaatgatcccaaatccaagcttcaacaatgctgc
cttactttgcgtacaatggatggcggagaaccggatatccccgtgtacaaagtgatcgag
tgcaaaggcccaaccaatacgcgcgtttattctgttgctgtttattttcgtggaattcgt
ttagccagtgcttctgggcatagcattcaacaagctgaaatgaacgcagctaaagaagcc
ttagaaaagtctaaagatctctttccgcaattgaatcaccagaagaaagtgattgcc
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integrated database retrieval system
