Daphnia pulex (common water flea): DAPPUDRAFT_442965
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Entry
DAPPUDRAFT_442965 CDS
T04347
Symbol
HDA4
Name
(GenBank) histone deacetylase HDAC4 protein-like protein
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_442965 (HDA4)
Enzymes [BR:
dpx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
DAPPUDRAFT_442965 (HDA4)
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
DAPPUDRAFT_442965 (HDA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
TFIIA
Motif
Other DBs
NCBI-ProteinID:
EFX72406
JGI:
Dappu1_442965
UniProt:
E9H797
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MVVGPVVGSSSSGSSVSSAITSASPAANNNNNLPSYREQAEIHHQIMQLKQQQQLQQQVL
LQRYQAQQQQLAHQHEQQMQEFLEQKKKAEEEARLERERHEKERLLALKNKEKREQSAVA
SSEVKQRLQEFVLNKKQREAAAAAAAAGNGTANAPSSSSAPYRAWTGAVPTLPASHGCSN
NKGSTSQLSSGLGSGIVHPHPYRHPLLSGNFDDDFPLRKTASEPNLLKMRYKHRGTVERR
NCSPLVARRRGGVPHHHLSAGSGPRMSQLTSNRRYSTNTHLVIEYFNDYPSLPPFHSIPG
WTTFSEISPSQYHLMASHGQGSISDLTLYSSPSLPNISLGRPAIASHHAAEPPGLAMVSE
VVDMRAAFSVRMGLPATGAGHHPLYQQPQPQHHPHAHPLHQHHHLLMPSGPPFFPPPPLD
SGGGDYGSSGGSPESPGYIQKQMQLLEQAGHHTQILMSGLYNGAPITDAQVAQARLNKSG
MRPLGRTQSAPLPLGHPLLQGAPHGVVPTVPLTQQQFDQYVRERHIYEQQHQHNLLKQQI
RQTVLTRAGSRSQVENVEEETEAAVAREMSRDRERGAPLPEVIDLTEHKLEEEAEADRHS
SRDGLSPLQLRVSSTRSSLQASPGSAFVPRGHHVARPLSRAFSSPLVSLDPPGAGPAGAG
ESGAAVVPMTLAAAGWGPSAGGAKTGSTSTALAYDGLMLRHQCMCGSNSAHPEHGGRLQS
IWARLQETGAVHRCLRLRSRKATAEELQSVHSDVYTMLFGTEPMHRPKVDVNRFAELPMK
NFVMLPCGGIGVDSDTTWNDIHTPSAARMAAGCVIDLAFKAAMGEIRNGFAIVRPPGHHA
EAQQAMGFCFFNSVAIAAKQLRLRHKLERILIVDWDVHHGNGTQQIFYEDPHILYISIHR
HDDGHFFPGTGNPLECGSEDGIGFNVNIAWSGGLNPPLGDAEYLAAFRALVMPIAQDFDP
EIVLVSAGFDAATGHPSPLGGYQVSAACFGYMTRQLMELAGGKLVMALEGGYDLPAICDA
SHECVRALLGDEPVPIREEELARRPCQNAIDSLHKVISIQQPHWPIIKRYAFSVSLSAYE
VEGVGRSRGEDSETLSAMAGLSVCRTDSSKSIAELSQEPMDQDESK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggtggttggtccggtcgttggctcctcttcttccggctcgtcggtttcatcggccatc
acgtcggccagtccggctgccaacaacaacaacaacctgcccagctacagggagcaggcc
gaaatccatcatcagataatgcagctcaagcagcagcagcaactgcagcaacaagtcctc
cttcagaggtaccaggcccagcagcagcagttggcccaccaacatgagcagcaaatgcag
gaatttctggaacagaaaaagaaagcggaagaagaggcccgtctggaacgggagaggcac
gaaaaggagcgattgctggccctcaagaacaaggagaagcgcgagcagagcgccgtggct
tcctccgaagtcaaacaaagactgcaggaattcgtgctgaataagaagcaacgcgaagcg
gcagcggcggccgcagctgccgggaatggaactgccaacgcgcccagctcctcgtcggcc
ccgtaccgagcctggactggagctgtgccgaccctaccggccagccatggatgcagcaac
aacaaaggatccacctcgcaattatccagcggattgggctccggcattgtccatcctcat
ccgtatcgccatcctctcctttccggcaatttcgacgacgactttcctctccgcaaaacc
gcgtcggaacccaacctgctcaaaatgcggtacaaacatcgcgggacggtggagcgtcgc
aactgcagtccgttggtggcccggcggaggggtggcgtacctcaccaccacctctcggcg
ggtagcggcccgcggatgtcgcagcttacaagtaatcgacgctactcaactaacacgcat
cttgtgatcgaatattttaacgattacccctctctaccccctttccattccattcccggt
tggaccacattttccgagatcagtccgtctcagtaccaccttatggccagtcatggtcag
ggaagcatttcggatctgacgctctactctagcccgtctttacccaacatatctcttggg
cggcccgcaatagccagccatcatgccgccgaacctcccggattggccatggtcagcgaa
gtggtggacatgcgcgcagctttctccgtccgtatgggactgccggccacaggagccggc
catcatccgctttaccagcaaccgcaacctcagcaccaccctcatgctcatcctcttcat
caacatcaccacctcctcatgccgtctggcccgcctttcttcccgccgccgccgctggat
tccggcggaggcgactacggatccagcggaggcagtcccgaatcgcccggctacattcaa
aagcaaatgcaactgctggagcaggccggccatcacacccaaattctgatgagcggactc
tacaacggcgcgcccatcaccgacgctcaggtcgcccaggcgagattgaacaaatcagga
atgcgtccgttgggacggacgcaatcggctcctttgccgctgggccacccgctgctgcag
ggagccccgcacggagtggtgcccaccgtgccgttgacgcagcagcaattcgaccagtac
gtccgcgaacgtcacatctacgaacaacaacaccagcacaatttgctcaaacagcaaatc
cgccagacggtcttgactcgggcgggtagccggagccaagtggaaaacgtggaggaagaa
acggaagcggccgtggctcgagaaatgtcacgcgaccgcgaacggggtgcccctctgccg
gaagtcatcgatttaactgagcacaagttggaggaagaggccgaagccgaccggcactct
tcgcgggacggcctttcgccccttcagttgcgcgtctctagcacaagaagttcccttcaa
gccagtccaggttcggcctttgttccacgtggccatcatgtcgcccggccgttgtctcgg
gcattttccagtcctttggtctctcttgacccacccggtgctggcccagccggagcaggc
gagagcggagccgctgtggtgcccatgactttagcggcagccggatggggtccgtcggcc
ggcggtgccaagacgggcagcactagcaccgcgctggcctacgacggcctcatgttgaga
caccagtgcatgtgcggcagcaacagcgcccacccggagcacggcggccgcctgcagagc
atctgggcccgtctccaggagactggagccgtccaccgctgcctgcggctccgctcgcgc
aaggccacggccgaagagctccagtcggtccactctgacgtctacacgatgctctttggc
acggaacccatgcaccgtcccaaggtggacgtcaatcgcttcgccgaattgcccatgaag
aatttcgtcatgttgccgtgcggcggcattggcgtcgactcggacacgacctggaacgac
atccacacgccttccgccgcccggatggctgccggctgcgtcatcgatctggcctttaag
gctgccatgggcgagattagaaacggtttcgccatcgtccgcccgccgggtcaccacgcc
gaagcccagcaagccatgggattttgcttcttcaattcggttgccatagcagccaaacag
ctcagactcaggcacaaacttgagcgcatcctcatcgtcgactgggacgtccatcacggt
aatggaacccagcaaatcttctatgaagaccctcacatcttgtacatttccatccatcgc
cacgacgacggtcattttttccctgggactggtaaccctcttgagtgcggctccgaagac
ggaattggattcaacgtcaatatcgcttggtccggtggacttaatccgccattaggagac
gccgaatatctggccgctttccgcgcccttgttatgcctattgctcaagatttcgaccca
gaaattgttctggtttcagccggatttgacgccgcaacgggacatccgtctcctctgggc
ggctaccaagtgtcggccgcctgttttggctacatgacgcgacaactaatggagttggcc
ggcggtaaacttgtcatggcgctcgaaggtggctatgatttaccggccatctgcgacgcc
tcgcacgagtgcgtccgggccctgctcggtgacgagccagtgcccattcgtgaagaagaa
ctcgccaggcggccgtgccaaaatgccattgattcgctccataaagtcatttcgatccag
caacctcactggcccattatcaagcgctacgccttctccgtcagcctgtcggcgtacgaa
gtcgaaggagtaggccggtcgcgcggcgaggacagcgaaacactttcagccatggccggc
ctctcggtctgccgcactgatagcagcaaaagcatcgcagagttgtcacaagagccgatg
gatcaagacgaatctaagtga
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integrated database retrieval system
