Daphnia pulex (common water flea): DAPPUDRAFT_46313
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Entry
DAPPUDRAFT_46313 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_46313
03012 Translation factors [BR:
dpx03012
]
DAPPUDRAFT_46313
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DAPPUDRAFT_46313
5.6.2.5 RNA 5'-3' helicase
DAPPUDRAFT_46313
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
Other ribosome biogenesis factors
DAPPUDRAFT_46313
Translation factors [BR:
dpx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
DAPPUDRAFT_46313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
SMUBP-2_HCS1_1B
AAA_30
AAA_12
AAA_19
ResIII
DEAD
AAA_16
Viral_helicase1
UvrD-helicase
nSTAND3
AAA_22
SLFN-g3_helicase
Flavi_DEAD
PhoH
Zot
ABC_tran
ATPase_2
AAA
AAA_31
AAA_25
Helicase_RecD
PIF1
IstB_IS21
NPHP3_N
ATPase
AAA_33
AAA_7
SRP54
CbiA
Motif
Other DBs
NCBI-ProteinID:
EFX84827
JGI:
Dappu1_46313
UniProt:
E9G5U9
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MQYNSIEDFVIQQLGLLNLERDAEIAESRRLQENISAKQLQEKGVCILNLVVQGIRSGLY
GRTIITFGCKLAGKELPSSNLSSGDIVGIFPNSSASQLEKDQICSGIVSCLKSSTIEIAL
DTDCDNVDLNDNDCYKLLQLANSVTYRRLKVGLNSLKNYQGPAASLINTLFGGQLFSSAS
LSLPPVLLGYDNDLVWFNKNLDHSQKEAVEFALKQREVAVVHGPPGTGKTTTVVEIILQT
VKAGGRVLACAPSNVAVDNMLEKLVANSSVKAIRLGHPTRMQEAIQNRSLDAVLSNSEAR
SIVNDVRRDLDAQLKQITKTKKRGPIFSEIKNLRKELRERETKAVKEVLSHANVILTTLT
SATQEGPLKHLPPDHFDYVVIDECSQSTESACWLALTRAPRVLLAGDHFQLPPTIISPEA
ERKGLGLTLMERIINRKEDGNLCVRMLTTQYRMHRDIMQWASNQLYHGKLEAHPSVASHL
LLELPGVEENEDTGTHFKCLLKPHIKKNEGDLHEDC
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcagtataacagtattgaagattttgtgatacagcagcttggattactgaaccttgaa
agagatgcagaaattgccgaaagtcgaaggcttcaagaaaatatttctgctaaacagctc
caagaaaaaggggtttgcatattaaatttagttgttcagggaataagatctggtctttat
ggtagaacaatcataacatttggttgcaagttggctggtaaagaattaccatcgtcgaat
ttaagttcaggggatattgttggaatatttcccaactccagtgcttcccagctggaaaag
gatcagatttgttctgggattgtcagctgtttaaaatcttctaccattgaaattgcccta
gacacagactgtgataatgttgacttgaacgacaatgactgctacaagttgttacagttg
gccaacagtgtgacctacaggaggctcaaagtgggattgaacagtttaaaaaattaccaa
ggccctgctgcctctctcatcaatacgctgtttggtggacagttattttcatctgcatca
ttatccttaccaccagtccttttaggatatgataatgatcttgtttggttcaacaagaac
ctagatcattctcaaaaagaagctgttgaatttgcgttgaagcagcgagaagtagcagtt
gttcacggccctccaggaacaggtaaaactacaactgttgtagaaattattctccaaaca
gtcaaagcaggaggtcgagttcttgcttgcgcgccttctaatgttgccgtcgataacatg
ctggagaaactcgtagcgaattcgtccgtaaaagctattcgtttgggtcatccaactagg
atgcaagaagccatccagaatcgttcactagatgctgttctttcaaacagtgaagctcgt
tctatcgtcaacgacgtccgtagagatcttgatgcccaactgaaacaaataacaaaaacc
aagaaacgaggacccattttcagcgaaattaagaatctaaggaaagaactgcgggaacgt
gaaacaaaagcagtaaaggaagttctctcccatgcaaatgtcattttgacgacattgact
agtgctacgcaggaaggacctctaaagcacttgccaccggatcattttgattacgtggta
atcgacgagtgttcacagtcgacagaatcagcctgctggcttgctttgacccgtgcaccg
agagtcctattagctggagatcactttcaacttccaccaaccatcatatcgcccgaagct
gagcgtaaaggtctcggcctcacactaatggaacgaatcatcaaccgcaaagaggacggc
aatttgtgcgtccgtatgttgacgacccaataccgtatgcatcgcgatatcatgcagtgg
gcatcgaatcagctttaccacggaaaactggaagcccatccttcagtagcgagccattta
ctcttggaattacccggcgtcgaggagaacgaagacacaggtacacattttaaatgttta
ttaaaaccacacattaagaaaaatgagggggatctacatgaagattgttga
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