Daphnia pulex (common water flea): DAPPUDRAFT_53422
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Entry
DAPPUDRAFT_53422 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_53422
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
DAPPUDRAFT_53422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
RuvA_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
DUF7070
PRORP
Motif
Other DBs
NCBI-ProteinID:
EFX78505
JGI:
Dappu1_53422
UniProt:
E9GPZ6
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
VEFALKLGYTEQQVQKALVKLGQPTQNELLAELIRLASLAGPGSTEGIESQSDCVRSHRP
LSITSSDEAVLRHVVIDGSNVAISHGNKEIFSCRGIQLCVDWFRARGHREITVFVPMWRK
ETSKIDAPIANQEILLELEKERMLVFTPSRQVGGRRLVCYDDRYILRLAAETDGIVVSND
NYRDLVSENPEYRKIVEERILMYSFVNDRFMPPEDPLGRNGPKLDRFLRKPPAKGSAEAT
APPCPYGKKCTYGNKCKYYHPERGNVPQKTISERSGHVPLGQQLSDPPSVTSSSGVEEPD
DSARPNPHRKVQRQLTLNPLNPACDPRLYTLKGLAPPYPPPPISVHSIVTRNASAPAPTS
QLHARSHPHVQPAGSNNHMQRLNSTSDTQLNLYGAAAAALPAHQHLSSSPVQAFNENGPN
SKSEARYKLFYHLAAIFPEEQVRQVMSLMPDETNAQKICAAILALYPKDN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtcgaatttgccttaaaattaggttatacagagcagcaagttcaaaaagctttggtcaaa
ttggggcaaccaacccagaatgaacttttggccgaactcatccgtttggcatctctagcc
ggaccagggtcgacggaaggaatcgaatcacagtcggattgtgttcgatctcatcgtcca
ttgtccatcactagttcagatgaggcggtgctaaggcatgtcgtcatcgatggaagcaac
gtcgccattagccatggcaacaaggaaattttctcatgtcgaggaatccagctgtgtgta
gactggttccgcgccagaggtcaccgtgaaataaccgtcttcgttcccatgtggcggaaa
gaaacgtctaaaattgacgcgcccatagccaatcaagagattttgctggaattggaaaag
gaacgaatgctggttttcactccgtcaaggcaagtcggtggccgtcgtttggtttgctac
gacgatcgttacatcttacgattggcggccgagacggacggcattgtcgtatccaacgac
aactaccgcgatctggtgtctgaaaatccagaatatcgaaaaatcgtcgaagaacgtatc
ctgatgtactcgttcgttaacgatcggtttatgccgcctgaagatccattgggtcgtaat
ggacccaaactggatcgcttcctgcgcaaacctccagccaagggatctgcagaagctact
gcccctccgtgtccatatggcaaaaaatgtacctatggaaacaagtgcaaatattatcat
ccggagagaggcaatgtccctcagaaaaccatcagcgaacgaagcggacatgtccccttg
gggcaacagttatcagatccgccctccgtgacttcttctagcggggtagaagagccagac
gactctgctcgacctaatccgcaccggaaggttcaacgtcaactgacattgaatccattg
aacccagcatgcgatccgcgattgtacaccttaaagggcttggctccgccttatccgcct
ccgcccatttccgtccactcgatcgtcactcgcaacgcatccgctccggcaccaacgtct
caacttcacgctcgctcccatccacatgtgcaacccgcaggatccaacaatcacatgcaa
cgactgaacagcacatccgacacacaacttaatttatacggggctgctgctgctgctctg
ccagctcatcaacacctgtcttcatcgccggtgcaagccttcaacgagaacgggcccaac
agtaaaagcgaagcacgttacaagctcttttatcacttggctgccatctttcctgaagaa
caggtgcgacaagtgatgtcactgatgcctgacgagacaaacgcccagaaaatctgcgct
gccattttggctctgtaccccaaagacaattag
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