Daphnia pulex (common water flea): DAPPUDRAFT_54979
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Entry
DAPPUDRAFT_54979 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K19026
spatacsin
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
DAPPUDRAFT_54979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_54979
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
DAPPUDRAFT_54979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Pox_mRNA-cap
Motif
Other DBs
NCBI-ProteinID:
EFX76567
JGI:
Dappu1_54979
UniProt:
E9GUX4
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
TLCADPTQLGRALLEAALNLEQNNEWPVAVELLIFSHSSFTLACDVENIGQILSQARCFI
DKLLLDQQWILITRLTTGIQRYTEMSYVFELLKEHDQFEYLLRKGMDRLPLLRQALLDFL
RPNCLENRELFRLVALHFHMHAEVAGMWQDEANGLLKPIVDLALPMLRTGPEMKKVLTSA
MHNLAHAAEYFLQAGRLNHANKCALQAELVALQIHLVNRAIDGHQIYCILGLNSAQAEII
SRGYGFNISWGKALMRHYIINGGTEYLERFVRRHTVTPAIVEEVVTDFEQESGLCKKQEI
LDRLSRLVSMLTDAEAKYRLASRLNLRHLVSELLSSSALPYLKDTAWGKKANQDL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
acactttgtgcggatcccactcaattaggacgggcccttttggaagcggcgctaaatctc
gaacaaaataacgagtggccagtggctgtagagctgcttattttctctcattccagtttc
acgcttgcttgcgacgtcgagaacattggccaaattcttagtcaggcccgttgcttcatc
gacaaacttcttctagatcaacagtggatcctcatcactcgactcacgaccggaattcag
cgctatactgagatgagctatgtattcgaactcttgaaggagcacgatcagtttgaatat
cttttgaggaagggaatggatcgccttccgcttttgcgacaggcgttgctcgatttcttg
agacccaattgcctagaaaaccgagaactctttcgattagtagcgcttcattttcatatg
cacgcagaagtggcgggaatgtggcaggatgaggccaatggtcttctcaagccaatcgtc
gatttggctttaccaatgctcagaactggaccggagatgaaaaaggttctaacatctgct
atgcataatctagcccatgctgccgaatactttctccaggctggaagattgaatcacgct
aacaagtgcgcattgcaagccgaattggttgcgttgcagatccatctagttaaccgcgct
attgatggccatcaaatttattgtatacttgggcttaattcagctcaagctgagatcatt
tcacgtggatacggcttcaatatttcctgggggaaggcgttgatgagacattacataatt
aatggtgggacagagtacttggaacgattcgtacggcgtcataccgtgacaccagcgata
gtggaagaggtcgttacagatttcgaacaagaatccggtctctgcaaaaagcaggaaata
ctggatcgtttatcccgccttgtctcgatgttgaccgatgccgaagccaaatatcgactg
gcgtcacgcttaaatcttagacatctcgtcagcgaactgctttcttcatcggcgcttcca
tatctaaaagatacggcatggggaaaaaaagccaatcaagatttataa
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