Daphnia pulex (common water flea): DAPPUDRAFT_55156
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Entry
DAPPUDRAFT_55156 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAPPUDRAFT_55156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_55156
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
DAPPUDRAFT_55156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
EFX76392
JGI:
Dappu1_55156
UniProt:
E9GVC3
LinkDB
All DBs
Position
Unknown
AA seq
181 aa
AA seq
DB search
MEQRDRHPYEFELNKFTPHPKFLTVQREVPRFKPVSSTPLIMVDTTEAFELLLRDLLSQM
VIGVDLEHHSERSYRGITCLMQISTDKTDYIVDTLQLWDHLQPLNEVFCDPKIVKIFQGA
DSDVIWLQRDFGIYVVNLFDTFQAATLLGFEKKSLSFLLQHYCQVHVNKKYQLEDWRIRP
L
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcgagacagacatccatacgaatttgaattgaacaaatttactccacatccg
aaatttttgacagtccaacgtgaggtgccacgtttcaaacctgtttcatcaactcctttg
atcatggttgatacaacagaagcttttgaactcctcttacgagatttattatcccagatg
gtgataggtgttgatcttgagcatcatagtgaaagatcgtatcgaggtattacttgcttg
atgcaaatttcaacagacaagactgactacattgtcgacacactacaactgtgggaccac
ttacagccactgaatgaagtcttctgtgatccaaaaattgttaagatattccaaggagct
gacagtgatgtcatttggctacagcgggatttcgggatttatgtagtcaatctttttgac
acatttcaagctgcaaccctccttggatttgaaaagaagagcttgtcttttcttcttcag
cactactgccaagtccatgtcaacaaaaaataccaactcgaagattggcgaattcgtcca
ttg
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