KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_55156
Entry
DAPPUDRAFT_55156  CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DAPPUDRAFT_55156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_55156
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     DAPPUDRAFT_55156
SSDB
Motif
Pfam: DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: EFX76392
JGI: Dappu1_55156
UniProt: E9GVC3
LinkDB
Position
Unknown
AA seq 181 aa
MEQRDRHPYEFELNKFTPHPKFLTVQREVPRFKPVSSTPLIMVDTTEAFELLLRDLLSQM
VIGVDLEHHSERSYRGITCLMQISTDKTDYIVDTLQLWDHLQPLNEVFCDPKIVKIFQGA
DSDVIWLQRDFGIYVVNLFDTFQAATLLGFEKKSLSFLLQHYCQVHVNKKYQLEDWRIRP
L
NT seq 543 nt   +upstreamnt  +downstreamnt
atggaacagcgagacagacatccatacgaatttgaattgaacaaatttactccacatccg
aaatttttgacagtccaacgtgaggtgccacgtttcaaacctgtttcatcaactcctttg
atcatggttgatacaacagaagcttttgaactcctcttacgagatttattatcccagatg
gtgataggtgttgatcttgagcatcatagtgaaagatcgtatcgaggtattacttgcttg
atgcaaatttcaacagacaagactgactacattgtcgacacactacaactgtgggaccac
ttacagccactgaatgaagtcttctgtgatccaaaaattgttaagatattccaaggagct
gacagtgatgtcatttggctacagcgggatttcgggatttatgtagtcaatctttttgac
acatttcaagctgcaaccctccttggatttgaaaagaagagcttgtcttttcttcttcag
cactactgccaagtccatgtcaacaaaaaataccaactcgaagattggcgaattcgtcca
ttg

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