Daphnia pulex (common water flea): DAPPUDRAFT_66464
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Entry
DAPPUDRAFT_66464 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAPPUDRAFT_66464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_66464
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
DAPPUDRAFT_66464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
EFX64106
JGI:
Dappu1_66464
UniProt:
E9HVX6
LinkDB
All DBs
Position
Unknown
AA seq
181 aa
AA seq
DB search
MEQRNRHPYEFELKKFSPDSKFLIIKHEIPHFLPVSSTPLIVVDTTEAFEQLLQDLLSQT
VIGVDLEHHSDRSYRGITCLMQISTDKTDYIIDTLKLWDHLQPLNKVFCDPNIVKIFQGA
DSDVIWLQRDFGIYVVNLFDTFQAASLLGFQKKGLSFLLQHYCQVHVDKKYQLEDWRIRP
L
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagaaatagacatccgtacgagttcgaattgaagaaattttctccagattca
aaatttttgataatcaaacatgaaataccacatttcctacctgtttcttcaacgccactg
attgtggttgatacaacagaagcttttgaacaactcttacaagatttgctatcacagacg
gtgataggtgttgatcttgagcatcatagtgacagatcatatcgaggtattacttgcttg
atgcaaatttcaacagacaagacggactacattattgacacacttaaattgtgggaccac
ttgcagccactgaataaagtattctgtgatcccaacattgtaaagatattccaaggagct
gacagtgatgtcatctggcttcaacgggattttggaatttatgtagtcaatctttttgac
acatttcaagctgcatctctccttggatttcaaaagaagggcttatcgtttcttcttcag
cactactgccaagttcatgtcgacaaaaaataccaactcgaagactggcgtattcgtcca
ttg
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