KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_66464
Entry
DAPPUDRAFT_66464  CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DAPPUDRAFT_66464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_66464
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     DAPPUDRAFT_66464
SSDB
Motif
Pfam: DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: EFX64106
JGI: Dappu1_66464
UniProt: E9HVX6
LinkDB
Position
Unknown
AA seq 181 aa
MEQRNRHPYEFELKKFSPDSKFLIIKHEIPHFLPVSSTPLIVVDTTEAFEQLLQDLLSQT
VIGVDLEHHSDRSYRGITCLMQISTDKTDYIIDTLKLWDHLQPLNKVFCDPNIVKIFQGA
DSDVIWLQRDFGIYVVNLFDTFQAASLLGFQKKGLSFLLQHYCQVHVDKKYQLEDWRIRP
L
NT seq 543 nt   +upstreamnt  +downstreamnt
atggaacagagaaatagacatccgtacgagttcgaattgaagaaattttctccagattca
aaatttttgataatcaaacatgaaataccacatttcctacctgtttcttcaacgccactg
attgtggttgatacaacagaagcttttgaacaactcttacaagatttgctatcacagacg
gtgataggtgttgatcttgagcatcatagtgacagatcatatcgaggtattacttgcttg
atgcaaatttcaacagacaagacggactacattattgacacacttaaattgtgggaccac
ttgcagccactgaataaagtattctgtgatcccaacattgtaaagatattccaaggagct
gacagtgatgtcatctggcttcaacgggattttggaatttatgtagtcaatctttttgac
acatttcaagctgcatctctccttggatttcaaaagaagggcttatcgtttcttcttcag
cactactgccaagttcatgtcgacaaaaaataccaactcgaagactggcgtattcgtcca
ttg

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