Daphnia pulex (common water flea): DAPPUDRAFT_96978
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Entry
DAPPUDRAFT_96978 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_96978
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
DAPPUDRAFT_96978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
EFX86852
JGI:
Dappu1_96978
UniProt:
E9G074
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MDKPKRRCVECKKTNFYNVNGQYVCVECDTYATDQVEIVCDEFEGQTQGRKYKSLGEKKD
RKNLEEEERNKRIQDWNIYDGFNFILVKMTDALIKCGADPNIKPCVHRLWASYLSKMEVA
YREASPPTSPLPDEFRTRETEMEEVEEQPSIVPSWFSQNNELDSQAESDDQPLKIKPKRT
TLFSAPKVAKRKYYKKGLGEMDILLETADAELSLAERRKKGRKLRSNYMKLALSGADTDV
SMAESIGSSAETQSTAEDGRKRSRLSTMKYAVPECFPEGELVSILKRKNKTEDYTAPRST
CSDPEYMTVHKLLSFLHAALLLKGQLITYGDLTRWTREGFIPLYGAHLLLPKSMPISGSE
AHTLGALRTNGAPCSRIFRQNTGRLLTMLNIGEIPKPPAFLLASKIICDLQLPNELEVYV
RTLDRIINQDDNDAEWKTVLFGNRIPSDAAYAGSLILVAMKLVFGLDGMTEFQISDFATK
VNNLLKLKPSSSFASKQQGVENENNQETSQGIKTLFVWKEWVRFIEYRRNVIDRTHVPTA
IRKAIVKKMDPAYVYQFAQTEGFYHYNRPTTELSEIDRSILEVFEKAAKRFPSPLGPPKR
IPRFRSSLFGLQGLADQLLEFDPSEYGQLKQEFSTSSLVFSRKPKLLAAALKKANPPHLL
KIHKGPALKDRKFVMPLITSRCGISKASSQMDRYAWKIVTVDSEVLPVSNSSDDDEELDE
FYDSQSRPSLLLHDPSYGYWISALRLKLVAFVDWNLFSASLPSSFLWLLQLICESIEESP
RDFYPTFNAVEAIVFLGHTDVKRNITGKKELKQRLYNALRAEF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggacaagccaaaacgaagatgtgtagagtgcaagaaaactaacttttataatgtcaat
ggacaatatgtgtgtgtcgaatgtgacacctatgctactgatcaagttgaaattgtttgt
gatgaatttgagggacaaactcaaggtcgaaaatataagtcacttggtgagaaaaaggat
aggaaaaacttagaggaagaagaacggaataagaggatacaagattggaatatatatgat
ggattcaattttattctggttaaaatgacggatgcactgatcaagtgtggtgctgatccc
aatatcaaaccctgtgtacacaggttatgggcttcctatctttccaaaatggaagttgca
tatcgtgaagcatcacctcctacatcacctttacctgacgaatttagaaccagggagaca
gagatggaagaagtggaggaacaaccttcaattgtcccatcttggttttctcaaaataat
gagctagattctcaagcagaaagtgatgatcaaccccttaaaatcaaaccaaaaagaact
acactgttttctgccccaaaagtggcgaaaagaaagtactacaagaagggcctgggcgaa
atggatattttacttgaaaccgctgatgccgaattatcgttagctgagagacgcaagaaa
ggccgaaaacttaggagtaactatatgaaactggcccttagtggagcagacactgatgtt
tcgatggcggagtcaattggttcatcagcagaaactcaaagtacagctgaagacggccga
aaaagaagtcgtttgtctaccatgaagtatgctgttcctgaatgctttcctgaaggagaa
ctagtttccatacttaagagaaaaaacaaaacagaggattatacggcacccaggtcaaca
tgcagcgacccagaatacatgacggtgcataaactattgtcatttcttcatgctgcgcta
ctcttgaaaggtcaattaataacttatggcgatttgacaaggtggacccgggaaggtttc
atccctctctacggcgctcatctacttttaccaaaaagtatgcctatcagtggatcggag
gctcatactttgggtgcactccggacaaatggagctccctgttctcgaatttttcgtcaa
aacactggccgtctccttacaatgctaaatatcggagagatacccaagccacctgccttt
ctgttggcgtctaagattatctgtgatcttcagttgccaaatgaacttgaagtgtatgtc
agaaccttggatagaattattaatcaggatgataacgacgctgaatggaaaaccgttctc
tttggtaacaggattccaagtgatgctgcgtacgctggatccctgatcctggttgccatg
aaattggtatttggattagatggaatgacagaatttcaaatttcagattttgccacgaaa
gttaacaatctgttaaaactaaaaccttcgtcaagcttcgctagcaaacagcaaggagtt
gaaaatgaaaataaccaagaaacatctcagggcataaaaactctgtttgtctggaaagag
tgggttcgatttattgaataccggcgcaacgtcatcgatcgcactcatgttccaacagcg
atccgaaaagcaattgtgaagaaaatggatcccgcctatgtgtatcaatttgcacaaact
gaaggattttatcattataaccgccctacaactgaattgtcagaaatcgataggtccatc
ttagaagttttcgaaaaagctgcgaagagatttccttccccgctcgggcctccaaaaaga
ataccaagatttcgttcctctcttttcggccttcagggcttggctgatcagcttttggaa
ttcgacccctcggaatatggacaacttaagcaagaattttccacttcgtctttagtattt
tccagaaaacccaaactgttggcagctgctctaaagaaggcgaatccaccgcatctctta
aaaattcacaagggcccagcattaaaggatagaaaattcgtcatgcctttgatcacttca
cgttgtgggatttcgaaagcttcaagtcaaatggatcgttacgcctggaaaatagtaaca
gtagattcggaagtactacctgtttccaactcttctgacgacgacgaagagcttgatgaa
ttttacgatagtcaatcgcgacctagtctgctgttacatgacccatcttacggttactgg
ataagcgcactccgtctaaaattggtggctttcgtcgactggaacttgttctccgcctcg
ttgccttcatcgtttctctggttgctccaacttatctgtgaaagcattgaagaaagccca
agagatttctacccaacgtttaacgctgttgaagctatcgttttcttaggtcacacagat
gtgaaacgcaacattaccggcaaaaaggagttaaagcagcgactatacaacgcattaaga
gcggaattctaa
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