Diaphorobacter nitroreducens: BA022_01235
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Entry
BA022_01235 CDS
T04937
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dpy
Diaphorobacter nitroreducens
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpy03009
]
BA022_01235 (rimO)
Enzymes [BR:
dpy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BA022_01235 (rimO)
Ribosome biogenesis [BR:
dpy03009
]
Prokaryotic type
ribosomal protein modification factors
BA022_01235 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
ASI67321
LinkDB
All DBs
Position
278087..279478
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AA seq
463 aa
AA seq
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MSQALSPAKTPKIGFVSLGCPKNLTDSELLLTQLSAEGYETSKTFEGADLVIVNTCGFID
EAVKESLDTIGEALAENGKVIVTGCLGARAGETGGNLVKEVHPSVLAVTGPHAAQEVMEV
VHTHCPKPHDPFLDLVPGSFGEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVGDVLKEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRTLELVQTLGEM
AATYGAWVRLHYVYPYPSVDDIIPLMAQGLVLPYLDVPFQHSHPDVLKRMKRPASGEKNL
ERILRWREACPEIVIRSTFIAGFPGETEEEFQHLLDFVREAQIDRAGCFAYSDVEGAAAN
ELPGMLPMELREERRARFMAVAEEVSTAKLQRRVGQTMQVLVDQAVGLGKKGGVGRSYAD
APEIDGVVHLLPPEKFSKTYKVGDFVKARIVGTQGHDLVGVPV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcactctcccccgccaagacccccaagatcgggttcgtcagcctcggctgc
cccaagaacctcaccgactccgaactcctcctcacgcaactcagcgccgagggctacgaa
acctccaagaccttcgagggcgcagacctcgtcatcgtcaacacctgcggcttcatcgat
gaagccgtgaaggaaagcctggacaccattggcgaggccttggccgagaacggcaaggtg
atcgttaccggctgcctgggcgcgcgcgccggcgagacgggcggcaacctcgtgaaagag
gtacaccccagcgtgctggccgtgaccgggccgcatgcggcgcaggaagtgatggaggtc
gtgcatacccactgccccaagccgcacgaccccttccttgacctggtgccgggcagcttc
ggcgaggcgggcatcaagctcacgccgcgccactatgcctacctgaagatcagcgagggc
tgcaaccaccgctgcaccttctgcatcatcccctcgatgcgcggcgacctggtgtcccgc
ccggtgggcgatgtgctcaaggaagccaaggcgctgttcgagggtggggtgaaggaactg
ctggtcatcagccaggacacatcggcctatggcgtggacgtgaagtaccgcacgggcttc
tgggacggcaagcccgtcaagacgcgcacgctggagttggtgcagacgctgggcgagatg
gccgccacctacggcgcgtgggtgcgcctgcactatgtctacccctacccgagcgtggac
gacatcattccgctgatggcgcagggcttggtgctgccgtacctggatgtgcccttccag
cacagccaccccgacgtgctcaagcgcatgaagcgccccgccagcggcgagaagaatctg
gagcgcatcctgcgctggcgcgaggcctgcccggagatcgtgatccgcagcaccttcatc
gcgggcttccccggcgagacggaagaagagttccagcacctgctggacttcgtgcgcgag
gcgcagatcgaccgtgcgggctgctttgcctacagcgacgtggagggcgccgccgccaac
gagctgccgggcatgctgcccatggaactgcgcgaggagcgccgtgcgcgcttcatggcg
gtggcggaggaagtctccaccgccaagctgcagcgccgcgtgggccagaccatgcaggtg
ctggtagaccaggccgtgggcctgggcaagaagggcggcgtgggccgcagctacgccgat
gcgcccgagatcgacggcgtggtgcacctgctgccgcccgagaaattcagcaagacctac
aaggtgggcgacttcgtgaaggcgcgcatcgtgggaacgcaggggcatgacctggtgggc
gtgccggtgtaa
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