Diaphorobacter nitroreducens: BA022_04075
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Entry
BA022_04075 CDS
T04937
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy03030
DNA replication
dpy03430
Mismatch repair
dpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BA022_04075
03430 Mismatch repair
BA022_04075
03440 Homologous recombination
BA022_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpy03032
]
BA022_04075
03400 DNA repair and recombination proteins [BR:
dpy03400
]
BA022_04075
Enzymes [BR:
dpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BA022_04075
DNA replication proteins [BR:
dpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BA022_04075
DNA repair and recombination proteins [BR:
dpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BA022_04075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASI67828
LinkDB
All DBs
Position
889708..893247
Genome browser
AA seq
1179 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTTRIDEVVKAAAKDGQPALAITDLNNLFGAIKFYKEGRGKGVKP
ILGAEIYLEGEAAGAPSRMVLLVQNRTGYLNLSELLARAWTRNIVRNQALCTWEWLQELG
DGLIALAGAQAGPVGQALMKGDDAGAARLALRLAGIFPHRFYLEVQRAGRPDDEAHVTAA
VQLAARLALPVVATHPVQFATPDDYEAHEARVCIAEGEILANPRRVRRFTREQYFKSSAE
MEALFADVPSALANTVEVAKRCNVSLVLGKPQLPNFPIPGGMTMEQYFRHASHEGLEERL
LHLYPDTAERDRQRPRYQERLEFELGTILKMGFPGYFLIVGDFIQWAKKNGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQANRDRVIDYVKDKYGK
EAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYPPEPKKEGD
KNNYALELEPILYERVRKEEDVRTIIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMQRHKGQENFAFENIPL
DDAATYKLFSDGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEVVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKAE
EMAEHRAIFRKGAAEKGISQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFYCANMTVEMDDTDKLKVLYEDAVKHFGMTFEPPDINRGNYRFEPVTDKVIRYGLGA
VKGTGQQAIEAIIAAREGQGVGPQGATRGPFKSLFDFCVRVDRTRVNKRTVEALIKAGAF
DALQLNRAALVASLDRAFEFANAQIANANQGGLFDMMGDDAIGSSTQEPDLVDVMPWGIK
ERLMQEKTAVGFYLSGHLFDEVHQEVRRFVRTAIDELVDSRETQVVAGIVSDYRIINGQR
GRLALFKLDDKSGVIEASADEGLINANAGLLKDDEFVVVSGRLQLDHFSGGLRMKVQQVW
DLAGARARYGRYLQVCLGQQLPDIGALVRDYPPQREETEHGEVLAHGLRVRMQLRCTAAA
GAATAEVQLGEASRFFPSDAALAAWSAQAGSGAVNVVYE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccacttgcgcttgcacactgaattttccgtcgtggacggaaccacccgtatc
gacgaggtcgtgaaggcggcggcgaaagacggccagcccgccctggcgatcacggacctg
aacaacctgttcggcgcgatcaagttctacaaggaaggccggggcaagggcgtcaagccc
atcctgggcgccgaaatctacctggagggcgaagcggcaggcgcaccctcgcgcatggtg
ctgctggtgcagaaccgcaccgggtatctgaacctctccgaactgctggcccgcgcgtgg
acgcgcaacatcgtcaggaaccaggcgctgtgcacctgggagtggctgcaggaattgggc
gacggcctgattgccctcgctggagcgcaggctgggcccgtggggcaggcgctcatgaag
ggcgatgacgccggagctgcgcggctggcgctgcgtctggcgggtattttcccgcaccgc
ttctacctggaggtccagcgcgccggacgacctgacgacgaagcccatgtcaccgccgcg
gtgcagcttgccgcgcgcctggccctgccggtggtagccacccacccggtgcagttcgca
acgccggacgattacgaggcgcacgaggcgcgtgtgtgcattgccgagggcgagatcttg
gcgaatccgcggcgcgtgcgccgtttcacgcgcgagcagtatttcaagagcagtgccgag
atggaagcgctgttcgccgatgtacccagcgcgctcgccaacaccgttgaggtggccaag
cgctgtaatgtgtcgctggtgctgggcaagccgcaactgccgaacttccccattccgggc
ggcatgactatggagcagtacttccgccacgcgtcccatgagggcctggaggagcggctg
ctgcacctgtacccggacaccgccgagcgcgaccgccagcgcccccgctaccaggagcgg
ctggagtttgaactgggcacgatcctgaagatgggatttcccggctacttcctcatcgtg
ggtgacttcatccagtgggccaagaagaacggctgcccggtgggccccgggcgcggctcg
ggtgcgggctcgctcgtggcctatgcgctcaagatcacggatctggatccgctgcaatac
aacctgctgttcgagcgcttcctgaaccccgaacgggtgtccatgcccgacttcgacatc
gatttttgccaggccaaccgcgaccgggtgatcgactatgtgaaggacaagtacggcaag
gaggccgtgagccagatcgccaccttcggcacgatggcggccaaggctgccatccgcgac
gtggggcgggtgatggatatgagctacacgttctgtgacggtatctcgaagctggtgccc
ggtaaacccggccagacctatacgctggcctacccgccagagcccaagaaggaaggggac
aagaacaactacgccctggagttggaacccatcctgtacgagcgcgtgcgcaaggaggag
gacgtgcgcaccatcatcgagatggcgcaaaagctcgaagggatgacgcgcaatattggc
atgcacgccggcggcgtgctgatcgcgccgggcaaactgaccgatttctgcccgctgtac
cagcagccaggcagcgaatcggcggtgagccagtacgacaaggacgacgtggaggccatc
ggcctggtgaaattcgacttcctgggcttggcgacgctgaccatcctggaaatcgcgcgt
gagttcatcatgcagcgtcacaaagggcaggaaaacttcgcgttcgagaacattcccctg
gacgatgctgcgacctacaaactgttctcggacggcaagacagaagccgtgttccagttt
gaaagccggggcatgcaaggcatgctcaaggaagcgcgcccaagcaggctggaagacctg
atcgccttgaatgccctgtaccggccgggccccatggacctgattcccagcttcgtgaac
cgcaagcacggcaaggaggtggtggagtacccgcatccgctggtggagcccgtgctggcc
gagacctacggcatcatggtctaccaggagcaggtgatgcagacggcgcaggtgctgggt
ggttactcgctcggcggcgccgacatgctgcgccgcgccatgggcaagaaaaaggccgag
gaaatggccgagcaccgtgccatcttccgcaagggtgcagccgaaaagggtatcagtcag
gacaaggccgacgaggtcttcgacctgatggaaaagttcgcgggttacggcttcaacaag
tcgcacgccgccgcctattcgctgctggcctaccacaccgggtggctcaaggtgcactac
acggcggagttttactgcgccaatatgaccgtggaaatggacgacaccgacaagctcaag
gtgctctatgaagatgcggtcaaacatttcggcatgaccttcgagccgccggacatcaac
cgcggcaattaccgcttcgagccggtgacggacaaggtcatccgctatggcttgggcgca
gtcaagggcacgggacagcaggcgatcgaggccatcatcgctgcacgcgaagggcagggc
gtgggcccacagggcgcaacccgggggcctttcaagagcttgtttgacttttgcgtacgc
gtggaccgcacgcgcgtcaacaagcgcacggtggaggcgctcatcaaggcgggcgccttc
gatgccctgcagctcaaccgtgccgcgctcgtggcatccctcgatcgggcgttcgagttt
gccaatgcgcagatcgccaacgccaaccaaggcgggctgttcgacatgatgggcgatgac
gccatcggctccagcacgcaggagcctgatctggtggatgtgatgccctggggcatcaag
gaacggctgatgcaggagaagaccgcggtgggcttctacctctcgggccacttgttcgat
gaagtgcaccaggaagtgcgccgcttcgtgcgcaccgctatcgacgaactggtagacagc
cgcgagacgcaggtggtagccggcatcgtgagcgactaccgcatcatcaacgggcagcgc
ggcaggctggcgttgttcaagctggacgacaagtcgggcgtcatcgaggcttccgccgac
gaagggctgatcaacgcgaacgccggcctgctcaaggacgatgaattcgtagtggtgagt
ggtcggctgcagttggaccacttcagcggaggcctgcgtatgaaggtgcagcaggtctgg
gatttggcgggtgcgcgggcacgctatgggcgctatctgcaggtgtgcctggggcagcag
ttgccagacatcggggcgctggtgcgtgactatcctccgcaacgggaggagacagaacac
ggcgaggtgcttgcccatggcctgcgcgtgcgcatgcagttgcgctgcacagcggcggcc
ggcgcggccacggccgaggtgcagttgggagaggccagcaggttctttcccagcgatgcc
gcgctggccgcgtggagcgctcaggcgggcagcggtgctgtgaatgtggtctatgagtag
DBGET
integrated database retrieval system
