Diaphorobacter nitroreducens: BA022_04105
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Entry
BA022_04105 CDS
T04937
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy00300
Lysine biosynthesis
dpy01100
Metabolic pathways
dpy01120
Microbial metabolism in diverse environments
dpy01230
Biosynthesis of amino acids
Module
dpy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BA022_04105
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpy01002
]
BA022_04105
Enzymes [BR:
dpy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BA022_04105
Peptidases and inhibitors [BR:
dpy01002
]
Metallo peptidases
Family M20
BA022_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ASI67834
LinkDB
All DBs
Position
complement(900455..901630)
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AA seq
391 aa
AA seq
DB search
MSSTLLLTEQLIARPSVTPDDAGCLDLLARRLAPLGFACERLDSGPENFRVSNLWSKRAA
TRSGQAQTATKTVVFAGHTDVVPTGPVEQWSSPPFTPTHRDGRLYGRGASDMKASIAAFV
VAVEEFLAATPDPRLDIALLLTSDEEGPSVDGTKVVIEQLRARGERLDWCIVGEPTSVEQ
TGDMIKNGRRGTLSGRLTVRGVQGHIAYPQLARNPIHQAVPALTELAATVWDEGNAFFPP
TSWQMSNIHGGTGATNVIPGQVVIDFNFRFSTESTAEGLQQRVHAVLDRHGLEYDLTWTL
GGQPFLTTPGELVQAVQQAIRAETGLETELSTTGGTSDGRFIAQICPQVIELGPPNASIH
KIDENVRLVDIEPLKNIYRRTLEHLNALAGA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaccctgctactgaccgaacagctcatcgcccgcccctccgtcacgcccgac
gacgcgggctgcctggacctgctggcccggcgcctcgctcccttgggctttgcctgcgaa
cgactggacagcgggcccgagaacttccgcgtcagcaatttatggtcaaaacgcgctgca
acgcgctctggacaagcgcaaacagctaccaaaacagtagtattcgccggccacaccgac
gtggtacccacgggccccgtggagcagtggagcagcccaccgttcacccccacacaccgg
gacggccgcctgtacggccgcggcgcgagtgacatgaaggcctcgatcgccgcattcgtc
gtcgcggtcgaggagttcctggccgccacgcccgacccgcgcctggacatcgcgctgctg
ctgaccagcgacgaggaaggcccctcggtggacggcaccaaggtggtcattgagcagttg
cgcgcgcgcggggagcggctggactggtgcatcgtgggcgagcctacctcggtcgagcag
accggcgacatgatcaagaacggccgccgcggcacgctgtccgggcggctcaccgtgcgg
ggggtgcagggccacatcgcctacccgcagctggcgcgcaaccccatccaccaggccgtg
cccgcgctcaccgagctcgccgccaccgtgtgggatgagggcaacgccttctttccgccc
accagttggcagatgagcaacatccacggcggcaccggcgcgaccaacgtgatccccggc
caggtggtgatcgacttcaacttccgcttcagcaccgaatcgaccgccgaagggctgcag
cagcgcgtgcatgcggtactggaccgccacggactggaatacgacctgacctggacgctg
ggcggccagcccttcctgaccacgccgggcgaactggtgcaggcggtgcagcaagccatc
cgcgccgagaccggtctggaaaccgagctgtccaccaccggcggcaccagcgacgggcgc
ttcattgcacagatttgcccccaggtgatcgagctgggcccgcccaacgccagcatccac
aagatcgacgagaacgtgcgcttggtcgacatcgagccgctcaagaacatctaccgccgc
acgctcgagcacctcaacgcactggcgggcgcatga
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