KEGG   Diaphorobacter nitroreducens: BA022_04870
Entry
BA022_04870       CDS       T04937                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
dpy  Diaphorobacter nitroreducens
Pathway
dpy00061  Fatty acid biosynthesis
dpy00071  Fatty acid degradation
dpy01100  Metabolic pathways
dpy01212  Fatty acid metabolism
dpy02024  Quorum sensing
dpy04146  Peroxisome
Module
dpy_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:dpy00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    BA022_04870
   00071 Fatty acid degradation
    BA022_04870
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    BA022_04870
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BA022_04870
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:dpy01004]
    BA022_04870
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dpy04147]
    BA022_04870
Enzymes [BR:dpy01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     BA022_04870
Lipid biosynthesis proteins [BR:dpy01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   BA022_04870
Exosome [BR:dpy04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   BA022_04870
  Exosomal proteins of breast cancer cells
   BA022_04870
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: ASI67968
LinkDB
Position
1074872..1076701
AA seq 609 aa
MKFPTPDLRGVQTLPELLAFRAALTPHSEAYRACDPGTGQWISLTWAQTQERVQQWSRAI
AASGLPQGARIAILLPNGLEAMSIDQAVMATGCVPVPLHAIDNPGSIAYILADAEVSLLV
VEEPEQWRRIRDVGMPLPHLMGVVTTNASIGLPTAAEQDVPVAPLAAWLQHAAADTPLPP
PPGPEDLAAIVYTSGTTGKPKGVMLSHANVVADVKAVLERIAPTPQDVFLSFLPLSHTFE
RTGGYYLPMASGSCVVYARSVAQLAEDLKNVRPTVLVSVPRIYERVHAKLIETLSPSPLK
MQLFQAAQAVGWKRFCAAQRLPAPQDDGAGGWMRALPWPLLRALVAKPLLAQFGGRVRVA
VSGGAPLSPTIAHCFLGLGLQLVQGYGMTETTPVVSVNTLEDNDPSTVGRALPGVEVRIG
ENRELQLRGPIVMKGYWKRPEDTARTVSADGWLGTGDQAEIVGGRIRILGRIKEIIVTST
GEKVPPADLELAITADALFEQAFVVGEQRPFIACVAVVHAEEWRQLAGQLGLDANDPASL
AHPSAQRAALARIEKLAAGFPRYAVPRAVHLVREPWTIENAFMTPTLKLKRTNLMAHYAA
AIEAMYQKR
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgaagttccccacccccgacctgcgcggcgtgcagacgctgcccgaactgctggcgttc
cgcgccgccctcactccccacagcgaggcctaccgtgcctgcgaccccggcaccggccag
tggatcagcctgacctgggcacagacccaggagcgcgtgcagcagtggagccgcgccatt
gccgcatcgggcctgccgcagggggcgcgcatcgccatcctgctgcccaacgggctggaa
gccatgagcatcgaccaggccgtgatggccacgggctgtgtgcccgtgcccctgcatgcc
atcgacaatccgggcagcattgcctacatcctggcggatgccgaggtgtcgctgctcgtc
gtggaagagccagagcaatggcggcgcatccgcgacgtgggcatgccgcttccgcacctg
atgggcgtggtgacgaccaacgccagcatcggcctgcccaccgccgccgagcaggacgta
ccggtcgcaccgctggctgcctggctgcagcatgccgcggcagatacgccgctgcccccg
ccgcccggccctgaggatctggcggcgatcgtctacaccagcggcaccaccggcaagccc
aagggggtgatgctcagccatgccaacgtggtggccgacgtgaaggcggtgctggagcgc
atcgcccccacgccacaggatgtgttcctgtccttcctgccgctgtcgcacaccttcgag
cgcacgggcggctactacctgcccatggcctcgggcagttgcgtggtctatgcgcgctcg
gtggcgcaactggcggaggatttgaagaatgtgcgccccacggtgctggtgtcggtgccg
cgcatttatgaacgcgtgcatgcaaagctcatcgagacgctgtcgccctcgcccttgaag
atgcagctgttccaggccgcgcaggccgtgggctggaagcggttttgcgccgcgcagcgc
ctgccagcaccccaggacgacggcgcgggcggctggatgcgcgccctgccctggccgctg
ttgcgtgccctggtggccaagccgctgctggcgcagttcggtggccgcgtgcgcgtggcc
gtgagcgggggcgcgccgctgtcgcccaccatcgcgcactgcttcctgggcctgggcctg
caactggtgcagggctacggcatgaccgaaaccacgcccgtggtcagcgtgaacacgctg
gaggacaacgacccatccaccgtcggccgcgccttgccgggcgtggaggtgcgcatcggc
gagaaccgcgaactgcagttgcgcggccctatcgtcatgaagggctactggaagcgcccc
gaggacacggcccgcaccgtctccgccgacggctggctgggcacgggcgaccaggccgag
atcgtcggcggccgcatccgcatcctggggcgcatcaaggaaatcatcgtcacctccacg
ggcgagaaggtgccgccggccgacctggagctggccatcaccgccgatgcgctgttcgag
caggcctttgtggtgggcgagcagcgccccttcatcgcctgcgtggccgtggtgcatgcc
gaagagtggcgccaactggccgggcaactggggctggacgccaacgaccctgccagcctt
gcgcaccccagcgcccaacgggcggcactggcgcgcatcgagaagctggcggccggcttc
ccgcgttatgcggtgccgcgcgccgtgcatctggtgcgcgagccatggacgatcgagaac
gcgttcatgacacccacgctcaagctcaagcgcaccaacctcatggcgcactacgcggcc
gccatcgaggccatgtaccaaaagcgctga

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