Diaphorobacter nitroreducens: BA022_05920
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Entry
BA022_05920 CDS
T04937
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BA022_05920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpy03400
]
BA022_05920
DNA repair and recombination proteins [BR:
dpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BA022_05920
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BA022_05920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
UB2H
P-loop_SecA
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
ASI68155
LinkDB
All DBs
Position
complement(1311287..1313383)
Genome browser
AA seq
698 aa
AA seq
DB search
MHEVTSEPAVGAADGQFVQFPGSPFSLYQPYPPAGDQPEAIAKLVEGVQDGEVFQTLLGV
TGSGKTFTMANVIARLGRPAIIFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSAINEHIEQMRLSCTKSLLERRDVVIVATVSAIYGIGEPESYHRMIMT
LRVGDQLSQRDAIAQLIRMQYQRNEQDFSRGKFRVRGDTIDVFPAEHSELAVRIELFDDE
VESLQLFDPLTGRIQQKIPRFTVYPSSHYVTPRDKVLAAVETIKQELDERLKFFVAEGKL
VEAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGSAPGEPPSTLTDYLPPDALMFLDES
HQMIGQLNAMYNGDRARKTTLVEYGFRLPSALDNRPLKFEEFEKRMRQVVFVSATPADYE
KEHSGQVVDQVVRPTGLVDPEVEVRPATHQVDDVLQEIRICTQKNQRVLITTLTKRMAEQ
LTDYLSDNGVKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNLHGKAILYADRITDSMRKAISETERRRAKQIAYNEA
RGITPRSIVKQVRDLIDGVYSEKAGQEAQRLREDAARQAELEEMSEKDIAREIKRLEKLM
LEHARNLEFEQAARVRDQLTRLKDRVFGAHGGDQIPAA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtcacctctgagccggccgttggcgcggcggacgggcagttcgtccagttt
ccaggttcgcccttttcgttgtaccagccatacccgcccgccggtgatcagcccgaagcc
atcgccaagctggtggagggcgtgcaggacggcgaggtgttccagaccctgctgggggtg
acgggctcaggcaagaccttcaccatggcgaacgtgatcgcccgcctgggacggccggcc
atcatcttcgcgcccaacaagacgctggccgcacagttgtacagcgagttccgcgagttc
tttcccaagaacgccgtggagtacttcgtgagctactacgactactaccagcccgaggcc
tatgtgcctcagcgcgacctgttcatcgagaaggacagcgccatcaacgagcacatcgag
cagatgcgcctgtcgtgcaccaagagcttgctggagcggcgcgatgtggtcatcgtggct
acggtgtcggccatctacggcattggcgagcccgagagctaccaccgcatgatcatgacg
ctgcgcgtgggcgaccagctgagccagcgtgatgcgatcgcgcagctgatccgcatgcag
taccagcgcaacgagcaggacttcagccggggcaagttccgcgtgcgtggcgacaccatc
gatgtgttccctgccgagcattccgagctggcggtgcgcatcgaactgttcgacgacgag
gtggaaagcctgcaactgttcgacccgctcacggggcgtatccagcaaaaaatcccgcgc
ttcacggtgtaccccagcagccattacgtgacgccgcgcgacaaggtgctggccgccgtg
gagaccatcaagcaggaactggacgagcggctcaagttcttcgtggccgagggcaagttg
gtggaggcgcaacggctggagcagcgcacgcgcttcgacctggaaatgctcagcgaagtg
gggcactgcaagggcatcgagaactacacgcgccacctgtcgggttctgcgcctggcgag
ccgccgagcacgctgaccgactacctcccgcccgatgcgctgatgttcctggatgagagc
caccagatgatcgggcaactcaacgccatgtacaacggcgaccgcgcgcgcaagaccacg
ctggtcgagtacggctttcgcctgccgtcggcattggacaaccggccgctcaagttcgag
gaattcgagaagcgcatgcggcaggtggtgtttgtttcggccactccggctgattatgag
aaagagcactcgggccaggtggtggaccaggtggtgcggcccaccggcttggtggacccg
gaggtggaggtgcgtcccgctacccatcaggtggatgacgtgctgcaggaaatacgcatt
tgcacgcaaaagaatcaacgcgtactcattacgacgctgacgaagcgcatggcggagcaa
ctgaccgattacctgagcgacaacggggtcaaggtgcgctatctgcactccgatatcgac
accgtggagcgcgtggaaatcattcgcgacctgcgcctgggagccttcgatgtcctggtg
ggaatcaacctgctgcgtgaggggctggacattcctgaggtctccctggtggccatcctg
gatgccgacaaggagggtttcctgcgcgccgaacgcagcctgatccagaccatcggccgg
gcggcgcgcaacctgcacggcaaggccattctgtatgccgaccggatcaccgactcaatg
cgcaaggcgatcagcgaaacggaacgccgccgcgccaaacagatcgcatacaacgaggcc
cggggtattacgccgcgcagcatcgtcaagcaggtgcgagacctgattgacggcgtgtac
agcgagaaggcaggccaggaagcccagcgactccgcgaagacgcggcgcggcaggccgaa
ctggaggagatgtccgaaaaggacattgcccgcgaaatcaagcggctggaaaagctcatg
ctggaacacgcccgcaacctggagtttgagcaggctgctcgggtgcgcgatcaattgacc
cgtctcaaggaccgggtgtttggagcgcatggcggcgatcaaatccctgccgcatga
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