Diaphorobacter nitroreducens: BA022_06535
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Entry
BA022_06535 CDS
T04937
Name
(GenBank) exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dpy
Diaphorobacter nitroreducens
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpy03400
]
BA022_06535
Enzymes [BR:
dpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BA022_06535
DNA repair and recombination proteins [BR:
dpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BA022_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ASI68258
LinkDB
All DBs
Position
complement(1442295..1444865)
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AA seq
856 aa
AA seq
DB search
MTPIAKDDHAAACSAGWCAVFEQVRSAAAQRGAHLAATVVLVPYAQLMGEARRQWQRAYP
QGFAPRFETTRNWAAQLGAPLAEGSEYAGDMARDAVTARALLDRAGLAAHREVLSGPLLE
MAAQLAVVAAAVAPDRRPDWGESARALLPAAGDGGALRLEAAAARIALEWVLASRHVGDV
LFESGVRAAVPLLVVVQGFQPDPLARTLARHWGEAGLVVDLPQVMDGRKAGVPTLHAVPD
AEDEAQRAAACVLQHLAQGQAPVALVANDRALTRRISALLGGAGVAVHDENGWLLSTTHA
AARLMAVLQACAWDATADAVLDWLKQSPAVDGAALRALEHWLRRAGARHWSGAATQLQAL
AERRPAEAALADQVQAWRAQLRAARPLAQWLQSLRVLLQDCGLWDGLQQDEAGARVLAEL
RLPEGLQDDLQDMDGAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARP
FAALVLPGCDEKRLQAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIARVDLL
WRVGDEGGEPLLPSPLVQALRLDGTGTDGADPRVTRSVPVAPTARPLPVGAQLPVQRLSS
SAYSDLRHCPYRFFALRQLQLQEDDELDAGLDKRDFGTWLHAVLQHFHEALQDAPTGDAA
ARTALMDEAAARATRELGLQEGDFLPYASGWPALRAGYLEWLGKHEAAGACFRQAELRAR
QPLGALELVGTLDRVDAVRPQGGGEPLALVIDYKTESDALTRGRIKAGSEDTQLAFYAAL
LQDDTLRAAYVNVGERGETRLHEQDDVVHLRDLLLDGITHDMQRIAAGAPLPALGEGSVC
EWCAARGLCRKDFWNE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatagcaaaagacgatcacgccgcggcgtgcagcgcggggtggtgcgcggtt
ttcgagcaggtgcgctcagcggccgcgcagcgcggcgcgcacctggcggccaccgtggtg
ctggtgccgtacgcccagctcatgggcgaggcgcgccggcaatggcagcgcgcctacccg
cagggtttcgcgccgcgcttcgagaccacgcgcaactgggctgcccagctgggcgcgcct
ctggcggagggcagcgagtacgcgggcgatatggcgcgcgatgcggtcactgcacgtgca
ttgctcgaccgcgccggtcttgccgcgcaccgcgaagtcctcagcggtccgctgctggag
atggccgcgcagttggcggtggtggcagcggccgtggctcctgaccggcgccctgactgg
ggcgagtcggcgcgcgccctgctgccggcggcgggcgacggtggcgcgctccggctggag
gccgccgcagcgcgcatcgccctggaatgggtgctggcctcgcgccacgtgggggatgtg
ctgttcgagtctggcgtgcgtgcggccgtgccgctgctggtggtggtgcagggcttccaa
cccgaccccctggcccgcacgctggcacggcactggggggaggcgggccttgtcgtggac
ctgccgcaggtgatggacggcaggaaggccggcgtgccaaccttgcatgccgtgcccgat
gccgaggacgaggcccagcgtgccgccgcctgtgtgctgcagcacctggcgcagggacag
gcgcccgtggcactggtggccaacgaccgcgcgctcacccgccgcatcagtgccttgctc
ggcggcgcaggcgtggcagtgcacgacgaaaacggctggctgctctccaccacccacgcc
gcggcgcgactgatggcggtgctgcaggcctgtgcctgggatgccaccgccgatgccgtg
ctcgactggctcaagcagtcgcccgcggtggatggggccgcactgcgcgcgctggagcac
tggctgcgccgtgcgggcgcccggcattggagcggcgcggcgacgcaactgcaggcgttg
gctgagcggcgcccggccgaggccgcgttggcggaccaggtacaggcctggcgcgcgcag
ctgcgggccgcgcggccgctggcccagtggttgcagtcgctgcgcgtgctgctgcaggac
tgcggcctgtgggacgggctgcagcaggacgaggccggtgcgcgcgtgctggccgagctg
cgcctgcccgagggcctgcaggacgatctgcaggacatggacggggccggtgcgcgcatg
gcgctggcggacttcacgcgctgggtaggggaggtgctggaatgcgcgcgctatcgaccg
gcctatgtggacgatgcacccgtggtggttctgcccctgccgcagctgctggcgcgcccg
ttcgctgcgctggtgctgcccggctgcgatgaaaaacgcctgcaggccgcgcctgaaccg
cccggcccctggacgcaggcacagcgcgagggactggggctgcccacgcgcgacctgttg
gccgccgcgcagcgcgccgcctggcggcaggccctgcgtattgcgcgtgtcgacctcctg
tggcgcgtgggtgacgaggggggcgaacccctcctgccgagtccgctggtccaggcgctt
cggctggacggaaccggcacggacggtgccgatccccgggtgacgcgcagcgtgcccgtg
gcacccacggcgcgtccgctgccggtgggcgcgcagctgccggtgcagcggctgtcgtcc
tcggcatattccgacctgcgccactgtccctaccgcttcttcgcgctgcgccaactgcag
ctgcaggaagacgacgaactggacgccgggctggacaaacgtgacttcggcacctggctg
catgccgtgctgcagcacttccatgaggcgttgcaggacgcgcccacgggcgacgccgcg
gcgcgcacggcgctcatggacgaggcggctgcgcgcgctacgcgcgagctggggctgcag
gagggcgacttcctgccctacgcctcgggctggcccgcgctgcgcgccggctatctggaa
tggctgggcaagcacgaagccgctggcgcctgttttcgccaggccgagctgcgcgcgcgc
cagccgctgggcgcgctggaactggtcggcacactggaccgtgtggacgccgtgcgtccg
cagggcggcggcgaacccctggcgctggtgatcgactacaagaccgagagcgacgccctc
acgcgcgggcgcatcaaggccgggtccgaggacacgcagctcgccttctatgccgcattg
ctgcaggacgacaccttgcgggccgcgtacgtgaatgtgggtgagcgcggcgaaacccgg
ctgcacgagcaggacgacgtggtgcacctgcgcgacctgctgctggacggcatcacgcac
gacatgcagcgcattgccgccggcgcgccgctgcccgcgttgggcgagggcagcgtgtgc
gaatggtgcgccgcgcgcggtctgtgccgcaaggatttctggaatgagtga
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