Diaphorobacter nitroreducens: BA022_07530
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Entry
BA022_07530 CDS
T04937
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dpy
Diaphorobacter nitroreducens
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpy03016
]
BA022_07530
Enzymes [BR:
dpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BA022_07530
Transfer RNA biogenesis [BR:
dpy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BA022_07530
Prokaryotic type
BA022_07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASI68424
LinkDB
All DBs
Position
complement(1652476..1653477)
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AA seq
333 aa
AA seq
DB search
MTERAPRIRVQRRPVHGVLLLDKPLGLSSNDALQKVKWLLRAEKAGHTGTLDPLASGVLP
LCFGAATKFSQLQLEAPKTYEAVALLGTTTTTGDAEGQVLARCAVDPAMLTPERLAAVQA
QFTGPIRQVPPMHSALKKDGKALYEYARAGIAVEREARDVTIHALKLALTHTEKAQPAIK
MVVTCSKGTYIRTLGEDIGQALGCGAHLTFLRRTDTGGIGVERCVTLEALQAMDEDARMA
CVHPVETLLAQHTAVTLDDDNAGRFLSGMRRRGAWPDAPAVAVFGACPRVLLGVGHVRGG
ELIPDRLLSPLEIQQILESSPRAERGTLEATTL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgcgctccccgcatccgggtgcagcggcgcccggtgcacggagtgctgctg
ctcgacaaacccctgggcctatccagcaatgacgccttgcagaaggtgaagtggctgctg
cgcgccgagaaggccggccacacgggcacgctggacccgctggccagtggcgtgctgccg
ctgtgctttggtgccgccaccaagttcagccagttgcagctggaagcgcccaagacctat
gaagccgtcgcattgttgggtaccaccacaaccaccggtgacgccgagggtcaggtgctg
gctcggtgcgcggtcgatccggccatgctcacgcccgagcggttggcggcggtacaggcg
cagttcaccggccccatccgccaggtgccgcccatgcacagcgcgctcaagaaagacggc
aaggcgctgtatgagtacgcgcgtgccggcattgccgtggagcgcgaggcgcgtgatgtc
acgatccatgcattgaaattggcgctaacgcacacggagaaagcgcaaccagctattaaa
atggtagtgacctgcagcaaaggtacctacatccgtaccctgggtgaagacatcggccag
gcgctgggctgcggcgcgcatctcacgttcctgcgccgtaccgacacgggcggtatcggc
gtggagcgctgcgtgacgctggaggcgctgcaggccatggacgaggatgcgcgcatggcc
tgcgtgcacccggtggagaccttgctggcgcagcacacggctgtcacgctggacgatgac
aatgccgggcgtttcctctcgggcatgcgccggcgcggcgcctggcccgacgcgcccgcc
gtggccgtgttcggggcgtgcccgcgcgtgctgctgggggtcgggcatgtgcggggagga
gagctgattccagaccggctgctcagcccccttgaaattcaacagattctggagagctcg
ccgcgggctgaacgcggcacattggaagcaactacgctatga
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