KEGG   Diaphorobacter nitroreducens: BA022_08770
Entry
BA022_08770       CDS       T04937                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
dpy  Diaphorobacter nitroreducens
Pathway
dpy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:dpy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BA022_08770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpy03021]
    BA022_08770
Transcription machinery [BR:dpy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BA022_08770
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 PhyR_sigma-like Sigma70_ECF HTH_20 HTH_IclR HTH_11 HTH_24 HTH_29 DUF6362 DUF8658 HTH_17 HTH_Tnp_4 HTH_28 HTH_31
Other DBs
NCBI-ProteinID: ASI68632
LinkDB
Position
complement(1886817..1887341)
AA seq 174 aa
MSATAPAQQHIQALYSDHHGWLHGWLRKKLGCTHQAADLAQDVFVRVLVRRVANPAAALH
IEEPRAYLSTIARGLVIDHWRRCELERAWLETLAALPEAEAPSPEQQLTILETLVALDRA
LDALPAAVRQAFLWAQLEGLTCPQIAQRLGVSLATAERYVAKGLRRCYELRFGS
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgtccgccaccgcgccagcccagcagcacattcaagccctgtacagcgaccaccacggt
tggctgcatggctggctgcgcaagaagttgggctgcacgcaccaggcggccgacttggcg
caggacgtgttcgtgcgcgtcctcgtccgtcgcgtggccaatcccgctgcggctttgcat
atcgaggagccgcgggcctatctctcgaccattgcccgcggcctggtcatcgaccactgg
cgccgctgcgaactggagcgggcctggctggaaaccctggccgccttgcccgaggccgaa
gcccccagccccgagcagcagctgacgatcctggaaaccctcgttgcccttgaccgcgcc
ctggatgcgctgcctgccgccgtgcggcaggcattcctgtgggcgcagctggagggactg
acctgcccgcagatcgcacaacgtctgggggtctcgctggccaccgccgagcgttacgtc
gccaagggcctgcgccgttgctacgagctgcgcttcgggtcatga

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