Diaphorobacter nitroreducens: BA022_10450
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Entry
BA022_10450 CDS
T04937
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA022_10450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpy03019
]
BA022_10450
03016 Transfer RNA biogenesis [BR:
dpy03016
]
BA022_10450
Enzymes [BR:
dpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BA022_10450
Messenger RNA biogenesis [BR:
dpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BA022_10450
Transfer RNA biogenesis [BR:
dpy03016
]
Prokaryotic type
tRNA degradation factors
BA022_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
TraK_C
DUF5813
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ASI68920
LinkDB
All DBs
Position
complement(2287083..2289266)
Genome browser
AA seq
727 aa
AA seq
DB search
MSIFNKVTKSFQWGDKTVVMETGEIARQASGAVLVNIDDTVVLATVVGSKQAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFYNEVHVVIHTI
SLNPEVDADIAAMIAVSAALSVSGIPFNGPIGAARVGYVNGEYVLNPGQTARKSSQLDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVFGHEQGKVAINAIHELVRDAGKPVWDWQPPAK
DETFIAKVTALAEDKLRAAYQIRSKQARTQALREASASVLESLKGEGVEFDAVKVEALLF
DIEAKIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRTHGSALFTRGETQALVVSTLGT
ERDAQRIDALAGEFEDRFIFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVACLPSK
DEFPYTIRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEISSFAPKLYTMKINPEKIRDVIGKGGATIRALTDETGCQINIEEDGTITIA
ATEAAKADEAKRRIEEITAEVEVGKIYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VEKVGDYLQEGQIVKVKVLETDDKGRVKLSMKALADRPAGDSGRPAPAERGERRERRDGG
ASEQQQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttttaacaaggtcaccaagtcgttccagtggggtgacaagaccgttgtcatg
gaaacgggtgagatcgcccgccaggcctcaggcgccgtgctggtgaacattgacgacacc
gtagtgctcgctaccgtggtggggtccaagcaggccaagcctggccaggacttcttcccg
ctgacggtggactacatcgagaagacctacgccgccggcaagatccccggcagcttcttc
aagcgcgaggccaagcccagcgagttggagacgctgaccagccgcctgatcgatcgaccg
atccgcccgctgttccccgagggcttctacaacgaggtgcatgtggtcatccacaccatc
tcgctcaaccccgaagtggacgctgacatcgccgccatgatcgccgtgagcgcagcgctg
tccgtttccggtattccgttcaatggccccatcggcgccgcacgcgtgggctacgtcaat
ggcgaatacgtgctgaaccccgggcagactgcgcgcaagagctcgcagttggacctggtg
gtggcgggcaccgaggccgctgtgctgatggtggagtccgaagcgcagcagctgtccgaa
gagatcatgctgggcgccgtggtgttcggccacgagcagggcaaggtggcgatcaacgcc
atccatgagctggtgcgcgacgctggcaagcccgtgtgggactggcagccgcctgccaag
gacgagactttcattgccaaggtcacggccctggcagaggacaagctgcgcgcggcttac
cagatccgcagcaagcaggcccgcacccaggccttgcgcgaggcatcggcctcggtgctg
gaatcgctgaagggcgagggcgtggagttcgacgccgtgaaggtcgaggccctgctgttc
gacatcgaagccaagatcgtgcgcagccagatcctggccggcgagccccgcatcgacggc
cgcgacacgcgcaccgtgcgccccatcgagatccgcaactccgtgctgccgcgcacccac
ggctccgccctgttcacgcgtggcgagacccaggcgctggtggtgtccacgctgggcacc
gagcgcgatgcgcagcgcatcgacgcactggccggcgagttcgaagaccgtttcatcttc
cactacaacatgcctcccttcgccacgggtgaagtgggccgcatgggctcgaccaagcgc
cgcgaaatcggccacggccgcctggccaagcgcgccctggtggcttgcctgccgagcaag
gacgagttcccctacaccatccgtgtggtgtcggagatcaccgaatccaatggctcctcg
tccatggcatcggtctgcggcggctgcctgtcgctgatggatgccggcgtgcccatgaag
gcgcacgtggccggtatcgccatgggcctgatcaaggaagacaaccgcttcgccgtgctg
accgacatcctgggcgatgaggaccacctgggcgacatggacttcaaggtggctggtacg
accaacggcatcaccgccctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgccctggcgcaggccaaggaagcacgtatgcacatcctgggcaagatgcag
gaagccatgggtgaagccaagaccgagatctcatccttcgcgcccaagctctacacgatg
aagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccaccatccgtgcc
ctgacggacgagaccggctgccagatcaacatcgaggaagacggcaccatcaccatcgca
gccaccgaggctgccaaggctgatgaagccaagcgccgcatcgaagagatcacggctgag
gttgaagtgggcaagatctacgaaggccctgtcaccaagatcctggacttcggcgcgttg
atcaacctgctgcccggcaaggacggcctgctgcacatcagccagatcgcccacgagcgt
gtggaaaaggtgggcgactacctgcaggaaggtcagatcgtgaaggtcaaggtgctggag
accgacgacaagggccgcgtcaagctgtccatgaaggcgctggctgaccgccccgccggc
gacagcggccgtcccgcccctgcggagcggggcgagcgtcgtgagcgccgtgatggcggt
gcttccgagcaacagcagcagtaa
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