Diaphorobacter nitroreducens: BA022_11250
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Entry
BA022_11250 CDS
T04937
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy00300
Lysine biosynthesis
dpy00470
D-Amino acid metabolism
dpy01100
Metabolic pathways
dpy01110
Biosynthesis of secondary metabolites
dpy01120
Microbial metabolism in diverse environments
dpy01230
Biosynthesis of amino acids
Module
dpy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
dpy_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BA022_11250
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BA022_11250
Enzymes [BR:
dpy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BA022_11250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
ASI69060
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All DBs
Position
2449394..2450689
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AA seq
431 aa
AA seq
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MTHPVLPGHPHLHYHDQALQLEGLRLADLAREFGTPLYVYSQAAMLDALGAYQRGFAGRK
VQICYAMKANSSLAVLQLFARHGCGFDIVSAGELQRVIAAGGDPAKVIFSGVGKTRAEMR
QALEVGIGCFNVESEAELDVLSEVAQSMGLRAPISIRVNPNVDAKTHPYISTGLKGNKFG
IAHERTVATYQRAAALPGLRVVGIDCHIGSQITEESPYLDAMDRMLDLVQAIEAAGIAIH
HIDFGGGLGIDYNGETPPRADALWAKLLAKLDARGYGDRQLMIEPGRSLVGNAGVCLTEV
LYLKPGEQKNFCVVDAAMNDLPRPAMYQAYHAIVPLQAATPTAVSHVYDVVGPICESGDW
IGRDRNLAVAAGDMLAVLSAGAYCSSMGSTYNTRPRPAEVLVDGARAHLIRTRESVNDIF
RSEKLVPQGNP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccgttctgcccggccacccccacttgcactaccacgaccaagcgcttcag
ttggagggccttcgccttgccgacctggcccgggagttcggcacgcccctctacgtctat
tcccaagcggccatgctggacgccctgggggcgtaccagcgcgggttcgctgggcgcaag
gtgcagatctgctatgccatgaaagcgaactcgtcgctcgctgtcctgcagcttttcgca
cgccacggttgcggcttcgacatcgtttctgccggcgaactgcaacgcgtgattgcagcc
ggcggcgacccggcgaaggtgatcttttccggcgtaggcaagacgcgcgcagaaatgcgc
caggcgctggaggtcggcattggctgcttcaacgtggagagcgaggcagaactcgacgtg
ctgagcgaagtggcccaatccatgggattgcgcgcgccgatcagcattcgtgtcaatccc
aacgtggacgccaagacgcacccctacatttccacgggcctcaagggcaacaagttcggt
atcgcccatgaacgcacggtcgccacctaccagcgcgcagccgccctgcccggcttgcgc
gtggtgggcatcgattgccacatcggctcccagatcacggaagagagcccgtatctggac
gccatggatcgcatgctggacctcgtgcaagccatcgaggccgcaggcatcgcgatccac
cacatcgattttggcggtggtctgggcatcgattacaacggcgaaacgccaccacgggcc
gacgcgctgtgggccaagctgttggcgaagctggacgcgcgcggctacggtgaccgccaa
ttgatgatcgagcccggtcgctccttagtgggcaacgccggtgtttgcctgacggaggtg
ctctacctcaagccaggcgagcaaaagaacttctgcgtcgtcgatgcggccatgaacgat
ttgccgcggccggcgatgtaccaggcctaccacgccatcgtgcccctgcaggcggccacc
ccgacggccgtgtcgcacgtgtatgacgtcgtcggcccgatctgcgaaagcggggactgg
atcggccgtgaccgcaacctggcggtggcagcgggcgatatgctggcggtgctgtccgcc
ggggcgtactgcagttccatggggagcacctacaacacccgtccccgacccgccgaggtg
ctggtggacggagcgcgagcccacctcatccgcacgcgcgaaagcgtgaacgacattttc
cgcagcgaaaagctggtaccgcagggcaacccttga
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