Diaphorobacter nitroreducens: BA022_12925
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Entry
BA022_12925 CDS
T04937
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BA022_12925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpy03021
]
BA022_12925
03400 DNA repair and recombination proteins [BR:
dpy03400
]
BA022_12925
Enzymes [BR:
dpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BA022_12925
Transcription machinery [BR:
dpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BA022_12925
DNA repair and recombination proteins [BR:
dpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BA022_12925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ASI69356
LinkDB
All DBs
Position
complement(2838588..2839580)
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKAINVEQLGPNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPEHVIATLSAGGKLDMQIKVEKGRGYVPGNLRRYADEATKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDA
PASSRGAATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaaggcaatcaatgtcgagcaacttggccccaaccgt
gccaaggtggcgttggagccttttgagcgcggttacgggcacacgctgggcaatgccatt
cgccgtgtactgctctcttccatggtgggttacgcagcaacggaggtgacgattgccggt
gtcttgcacgaatactcgtccattgacggcgttcaggaggatgtggtcaacatcctgctg
aacctcaagggggtggtgttcaagctgcacaaccgtgacgaagtcacgctgagcctgcgc
aaggatggcgaaggcgtcgtcacggcgcgcgacatccagacgccgcacgacgttgaaatc
gtgaaccccgagcacgtcattgccacgctgtctgcgggcggcaagctggacatgcagatc
aaggtggagaagggccgcggttacgtgcccggcaatctgcgccgctacgcggacgaggcg
acgaagtccattggccgtatcgtgctggatgcttccttctcgccggtgaaacgcgtgagc
tataccgtcgagagcgcgcgtgtggaacagcgcacggacctggataagctcgtcgtcgag
atcgaaaccaacggcgctattactgccgaggacgcggtccgcgcttccgccaagattctg
gtggaacaactggcagtgttcgcgcagttggaaggcggtgagttggcagctttcgatgcg
ccggcaagctctcgcggcgctgcgaccttcgatccgatcctgctgcgtcctgtggacgaa
ctggaactcaccgttcgctccgccaactgcctcaaggcggagaacatctattacatcggt
gatctgattcagcgaaccgagaatgaactgctgaagacgccgaacctgggtcgcaagtcg
ctcaacgagatcaaggaagtgctcgcttcgcgcggcctgaccctgggtatgaagctcgag
aactggcctccggcagggctcgacaagcgttaa
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