Diaphorobacter nitroreducens: BA022_13720
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Entry
BA022_13720 CDS
T04937
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy00550
Peptidoglycan biosynthesis
dpy01100
Metabolic pathways
dpy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BA022_13720
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BA022_13720
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dpy01011
]
BA022_13720
Enzymes [BR:
dpy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BA022_13720
Peptidoglycan biosynthesis and degradation proteins [BR:
dpy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BA022_13720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
Motif
Other DBs
NCBI-ProteinID:
ASI69504
LinkDB
All DBs
Position
complement(2986245..2988185)
Genome browser
AA seq
646 aa
AA seq
DB search
MTELRNAEADVWHFRLRVFVVGVVVLLAFLLIVARLVVLQVVRHEDLADQAESNRTAVVP
IVPNRGLILDRNGVVLATNYSAYTLEITPSRTMDLEATIDALAEVVDIQPRDRRRFKRLR
EESRSFDSLPIRTRLSDEEVARFAAQRYRFPGVDIKARLFRNYPLGEVASHAIGYIGRIN
QREKERIEDSDDAANYRGTDYIGKLGVEQSFESTLHGQTGFERMETSAGGHAVRRLNSHP
ATPGNTVMLSLDIKLQKLIEDMFGERRGALVALDPRNGEVLALVSKPTFDPNLFVEGIDQ
ENWQALNESINKPLLNRALRGTYPPGSTYKPFMALAALELGKRTAGQVFNDPGYYNYGGR
TFRSHEGGLGGVDMHRAIQYSSNTYFYSLAVEMGVDAIHDFMKPLGFGQITGIDLGGEVR
GVLPSTEWKRNTYKRPEAKRWYSGETVSLGIGQGYNNFTMLQLAVAEATLANGGTRHRPH
LIKAVKDQVGGQVTEVQQPPGERLGYNPKHVAIVNNALMAVNQAGTGRRVFAGAPYTSAG
KTGTAQAVSLGQNVRYNAKLLEEHQRDHSLFAAFAPVEEPRIAVAVIVENAGFGAAAAAP
IVRRVFDYWLLGQYPSEQDLAAVSKGQAGAPMGTPRNVADVPLAMP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactgcgcaatgccgaggccgatgtctggcactttcgcctgcgcgtgttcgtc
gtgggcgtggtggtgctgctggcattcctgctgatcgtcgcgcgcctggtggtgctgcag
gtggtgcgccacgaggacctcgcggaccaggccgagagcaaccgcacggcggtcgtgccc
atcgtgcccaaccgcggcctcatcctggaccgcaacggcgtggtgctggccaccaactac
tcggcatacacgctggagatcacgccctcgcggaccatggacctggaggcgacgatcgac
gcgctggccgaggtcgtggacatccagccgcgcgaccggcgccgcttcaagcgtctgcgc
gaggagtcgcgcagcttcgactccctgcccattcgcacacggctgtcggacgaagaggtg
gcgcgctttgcggcgcagcgctaccgcttccccggcgtggacatcaaggcgcggctgttt
cgcaactacccgctgggcgaggtggcgagccacgccatcggctacatcggccgcatcaac
cagcgcgaaaaggagcgcatcgaggactcggacgatgcggccaactaccgcggcacggac
tacatcggcaagctgggggtggagcagagcttcgaatccacgctccacggccagacgggg
ttcgagcgcatggagacctcggccggcgggcatgccgtgcggcgcctgaacagccacccg
gcgacgccgggcaacacggtgatgctgtcgctggacatcaagctgcaaaagctgatcgaa
gatatgttcggcgagcgccgcggcgctctggtagcgctggacccgcgcaacggcgaggtg
ctggcgctggtgtccaaacccacgttcgaccccaacctgttcgtcgagggcatcgaccag
gaaaactggcaggcgctcaacgagtccatcaacaagccgctgctcaaccgcgcgctgcgc
ggcacctaccctcccggctccacctacaagcccttcatggcgctggccgcgctggagctg
ggcaagcgcacggcggggcaggtgttcaacgacccgggctattacaactatggcgggcgc
accttccgcagccatgaaggcggcctgggcggcgtggacatgcaccgcgccatccagtat
tcgagcaacacctacttctattcgctggccgtggagatgggggtggacgccatccacgac
ttcatgaagccgttgggcttcgggcagatcaccggcatcgacctcgggggcgaagtgcgc
ggcgtgctgcccagcaccgagtggaagcgcaacacctacaagcgcccggaggccaagcgc
tggtactcgggcgagacggtgtcgctgggcatcggccagggctacaacaacttcaccatg
ctgcagctggccgtggccgaggccacgctggccaacggcggcacccgccaccgtccgcac
ctgatcaaggccgtgaaagaccaggtgggcgggcaggtcaccgaggtgcagcagcccccc
ggcgagcgtctgggctacaaccccaagcatgtggcgatcgtgaacaacgcgctgatggcc
gtgaaccaggcgggcacggggcggcgcgtgttcgcgggcgcgccctacacctcggcgggc
aaaaccggtacggcgcaggcggtgagcctggggcagaacgtgcggtacaacgccaagctg
ctggaggagcaccagcgcgaccattccctgtttgccgcgttcgcgcccgtggaggagccc
cgcatcgccgtggccgtgatcgtggagaacgcgggctttggcgcggcggcggcggcgccc
atcgtgcgccgcgtgttcgactactggctgctgggccagtacccgagcgagcaagacctg
gcggccgtctccaaggggcaggccggtgctcccatgggcacgccgcgcaacgtggcggac
gtgccgctcgcgatgccttga
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