Diaphorobacter nitroreducens: BA022_17600
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Entry
BA022_17600 CDS
T04937
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dpy
Diaphorobacter nitroreducens
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpy03016
]
BA022_17600
Enzymes [BR:
dpy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BA022_17600
Transfer RNA biogenesis [BR:
dpy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BA022_17600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
ASI70190
LinkDB
All DBs
Position
complement(3841452..3843623)
Genome browser
AA seq
723 aa
AA seq
DB search
MHALFDEAGKFLAGRILSEAESSAQIELDSGKRVKVKAANILLKFDKPAPAELLAQAREI
AAGVELPLAWEFAPEEEFGFAELARDYFSAQAPVTEQAGMLVALFEAPHYFRRAGKGRFR
KASAEVLQQALAAIEKKKQIQAQIDAWAAELVAGTCPQPVREQLYKILFRPDKNAPEYKA
VVEASRSAQKAPLDLLQAAGAIDSSYQFHWKRFLFDNFPKGTGFPQLAAPQPPADLPLAD
VQAYSIDDSATTEIDDALSVQGLGTGTVTLGIHIAAPGLAIQPGGDLDKLGRTRLSTVYM
PGYKITMLPDEVVQIYTLDEGRANPAVSLYVTIDEATLAITATETRLERVPVTVNLRHDQ
LDHIVTEEWLADPTIQHENTPQALLDLREQLSFLHRLAKQLKAQREVVRGKPETFNRPDY
TFRLSAARPPEGANAPAGGSAASEAASVGAHKPRNDGAEPNGSETVDITTRKRGAPLDLI
VAEAAIVANSTWGNMLAEHGVPGIYRSQASLAPGVKVRMSTKALPHAGIGVKSYAWATSP
LRRYVDLVNQWQIIACARHGKTAALAAPFKPKDAELFSIISSFDAAYSAYNGYQAGMERF
WTLKYLQQNQITELDATVFKEGPNGSFLVRADTLPLVLPVLGAQQLPRGARVRVKLGEID
EITLDVAGTLVARLDDPLDASDDGPVDEDEGDEEAVAGPIAIAVDVNEAEGEGAGGTADN
RAP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcactgttcgacgaagccggcaagttcctggccggccgcatcctctccgaagcc
gaaagctcggcacagattgagctcgactcgggtaaacgcgtcaaggtcaaggccgccaac
atcctgttgaagttcgacaagcccgccccggccgagctgctggcgcaggcgcgcgagatc
gccgccggcgtggagcttccgctggcctgggagttcgcgcccgaggaggagttcggcttc
gccgagttggcgcgcgactatttttctgcccaggcgccggtgaccgagcaagccggcatg
ctggtggcgctgttcgaggcgccgcactacttccgccgcgcgggcaaggggcgttttcgc
aaggcgtcggccgaggtgctgcagcaggccctcgccgccatcgagaagaaaaagcagatc
caggcgcagatcgacgcctgggccgccgagctcgtcgccggcacctgcccgcagcccgtg
cgcgagcagctctacaaaattctgttccgccccgacaagaacgcgcccgagtacaaggcc
gtggtcgaggccagccgcagcgcgcagaaggctccgctggacctgttgcaggccgcgggt
gcgatcgactccagctaccagttccactggaagcggtttttgttcgacaacttccccaag
ggcacgggctttccccagctggcggcaccccagccgccggccgacctgccgctggcggat
gtgcaggcctattccatcgacgattcggccaccaccgagatcgacgacgccctgtcggta
cagggcctgggcaccggcaccgtgacgctgggcatccacattgccgcgccgggcctggcg
atccaacccgggggcgacctggacaagctggggcgcacgcgcctgtccaccgtctacatg
ccgggctacaagatcaccatgctgcccgacgaggtggtgcagatctacacgctggacgag
ggccgcgccaacccggccgtgtcgctgtatgtgacgatcgacgaggccacgctggccatc
accgccaccgagacgcgcctggagcgcgtgcccgtaacggtgaacctgcgccacgaccag
ctggaccacatcgtgacggaagagtggttggccgacccaaccattcaacatgaaaacacg
ccacaggccttgctggatctgcgcgagcagctctcctttttgcaccgactggccaagcag
ctcaaggcccagcgcgaagtcgtgcgcggcaagcccgaaaccttcaaccgccccgactac
accttccggctgagcgccgcccggccgcccgaaggcgcgaacgcccccgcggggggcagc
gcagccagcgaagcggcaagcgtgggggcccacaagccccgcaacgacggcgccgagccc
aacggcagcgaaacggtggacatcaccacccgcaagcgcggcgcgccgctggacctgatc
gtggccgaggccgccatcgtcgccaacagcacctggggcaacatgctggccgagcacggc
gtgcccggcatctaccgcagccaggccagcctggcgccgggggtcaaggtgcgcatgtcc
acgaaggcgctgccgcacgccggcatcggcgtgaagagctacgcctgggccacctcgccg
ctgcgccgctacgtggacctggtgaaccagtggcagatcattgcctgcgcgcgccacggc
aagacagctgcactggccgcaccgttcaagcccaaggacgcggagctgttctccatcatc
agcagcttcgatgccgcctacagcgcctacaacggctaccaggccggcatggagcgcttc
tggacgctcaagtacctgcagcagaaccagatcaccgagctggacgccaccgtgttcaag
gaagggccgaacggcagcttcctggtgcgcgccgacaccctgccactggtgctgcccgtg
ctgggcgcgcagcaactgccgcgcggcgcacgcgtgcgcgtcaagctcggcgagatcgac
gagatcacgctggacgtggcgggcaccctggtggcgcgcctggacgacccgctggatgcc
agcgacgacggcccggtggacgaggacgagggcgacgaggaggccgtggccggcccgatc
gccatcgcggtcgatgtcaacgaggccgagggcgagggcgccggcggcaccgctgataat
cgggcgccgtga
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