Diaphorobacter nitroreducens: BA022_18550
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Entry
BA022_18550 CDS
T04937
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dpy
Diaphorobacter nitroreducens
Pathway
dpy03410
Base excision repair
dpy03430
Mismatch repair
dpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BA022_18550
03430 Mismatch repair
BA022_18550
03440 Homologous recombination
BA022_18550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpy03400
]
BA022_18550
DNA repair and recombination proteins [BR:
dpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BA022_18550
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BA022_18550
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BA022_18550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
ASI70357
LinkDB
All DBs
Position
complement(4047756..4049480)
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AA seq
574 aa
AA seq
DB search
MKIVARDIPPRVVWALEQAGVHPLLARLYAARGIRAKEELDDALARLLPPDTLMGVQQAA
ALLADAISQDRRLLIVADYDCDGATACAVGVRGLRLLGARHVQYLVPDRVVDGYGLTASI
AQRVHERGADVLITVDNGIASIEGVARAKALGLTVLITDHHLPGPELPAADAIVNPNQPG
CGFESKSIAGVGVMFYVLMALRAELRARGVFDKATQPKLEPLLPLVALGTVADVVRLDNN
NRRLVAQGLKRIRAGQMQAGIQALFDAAGRKAPVATTFDFGFALGPRINAAGRLADMTLG
IECLLTDDPARAADLARQLDAINRERRELEGGMREQALLLAESLFDEGEEPPPAISVFDP
DFHEGVVGIVASRLKDKLHRPTFVFAASSAPGKEHELKGSGRSIPGFHLRDALDLVAKRH
PGVILKFGGHAMAAGCTVAEEHFDLFEQAFAQVAQEWLDAATLTRRLETDGPLAPEYCRA
ELVDTLHREVWGQGFAPPTFSEEVQVLSQRLVGEARNHLSIKLLHQGQPVDAIWFGHTDP
LPERALLAFRLDVNEWRGERRVQFLVEGLESPAM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtagcaagagacatcccaccgcgcgtggtctgggcgctggagcaggccggc
gtgcacccgctgctggcacgcctgtacgcggcgcgcggcatccgcgccaaggaggagctg
gacgacgccctcgcccgcctgctgccgcccgacaccctcatgggcgtgcagcaggccgcg
gcgctgctggccgatgccatcagccaggaccggcgcctgctcatcgtggccgactacgac
tgcgacggcgccaccgcctgcgcggtgggggtgcgcggcctgcgcctgctgggcgcacgc
catgttcagtatttggtgcccgaccgcgtggtggacggctacggcctcaccgcctccatc
gcgcagcgcgtgcacgagcgcggcgccgacgtgctcatcaccgtggacaacggcatcgcc
agcattgagggcgtggcgcgcgccaaggcgctggggctgacggtgctcatcaccgaccac
catctgcccggccctgaacttcccgcggccgacgccatcgtcaaccccaaccagcccggc
tgcggcttcgagagcaaatccatcgccggcgtgggcgtgatgttctatgtactgatggcg
ctgcgcgccgagctgcgcgcgcgcggcgtgttcgacaaggccacgcaacccaagctggag
ccgctgctgccgctggtggccctgggcaccgtggccgacgtggtgcgcctggacaacaac
aaccgccgcctggtcgcgcagggcttgaagcgcatccgcgccggccagatgcaggccggc
atccaggccctgttcgacgccgccgggcgcaaggcccccgtcgccaccaccttcgacttc
ggctttgcccttgggccccgcatcaacgccgcggggcgcctggccgacatgacgctgggc
atcgaatgcctgctgaccgacgacccggcgcgcgccgccgacctggcccggcaactggat
gccatcaaccgcgaacggcgcgaactggagggcggcatgcgcgagcaggccctgctgctg
gcggagagcctgttcgacgaaggcgaggagccgccgcccgccatcagcgtgttcgacccc
gacttccatgagggcgtggtgggcatcgtggcctcgcggctcaaggacaagttgcaccgc
cccaccttcgtgttcgctgccagcagcgcgccgggcaaggagcatgagctgaagggttca
gggcgctccatccccggttttcacctgcgcgacgcgctggacctggtagccaagcgccac
cccggcgtgatcctgaagttcggcggccacgccatggcggccggctgcaccgtggccgag
gagcatttcgacctcttcgagcaggccttcgcccaggtcgcacaggaatggctggatgcc
gcgacgctcacgcgccggctggagaccgacggcccgctggccccggaatactgtcgtgcg
gaactggtggacacgctgcaccgcgaggtctggggccagggctttgccccgcccaccttc
agcgaggaagtgcaggtgctgagccagcgcctggtgggtgaggcgcgcaaccacctgtcc
atcaagctgctgcaccagggccagcccgtggacgccatctggttcggccacaccgacccg
ctgcccgaacgggcgttgctggccttccggctggacgtgaacgagtggcggggcgagcgg
cgggtgcagtttctggtggagggactggagtcgcctgcaatgtga
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