Daphnia pulicaria: 124311004
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Entry
124311004 CDS
T08670
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00061
Fatty acid biosynthesis
dpz00071
Fatty acid degradation
dpz01100
Metabolic pathways
dpz01212
Fatty acid metabolism
dpz04146
Peroxisome
Module
dpz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124311004
00071 Fatty acid degradation
124311004
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124311004
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dpz01004
]
124311004
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpz04147
]
124311004
Enzymes [BR:
dpz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124311004
Lipid biosynthesis proteins [BR:
dpz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124311004
Exosome [BR:
dpz04147
]
Exosomal proteins
Exosomal proteins of breast milk
124311004
Exosomal proteins of breast cancer cells
124311004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124311004
NCBI-ProteinID:
XP_046631189
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Position
8:10075746..10083741
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AA seq
706 aa
AA seq
DB search
MILSAAHAVAAGPVVALQKIKGPDVEQYLHYVSGAAGMLAMAGVGVAAASAYYLANRPIP
TTPPFDLDNQTIVEGPELIHYSRFAKDGKEMKFMRYLYEDTRTLYDVFRRGARVSNNGPC
LGWREDPTKQYQWMRYEETLLRAQNLGSGLVALGLKPTPDTLVGVYGQNSPEWVLSEYAL
YSYSMVIVPLYDTLGPEACNYIINQAEMSLVICDNEDKCKSLLNNSPPCLKQLVHMKPIS
QETIELAKRKGINTLSFDYVEKLGAEKKHRPVPPRPEDLSTICYTSGTTGNPKGVMLTHE
NVVADVSATLLQLGDQKPNCSDVMMSFLPLAHMLERICQIAVYMQGGAIGFFGGDVRNLM
DDMKALRPTITPAVPRLLNRIFDKVQSGLNSSSLKRFLFNAALSSKENELRRGIIRNNTI
WDKLVLGKVQDSMGGRIRLLVVGSAPLAGSVLTFMRCALGCVIVEGYGQTECVAPTTLTV
QGDSTPEHVGPPIPCCAIKLVDVPDMNYYAASGHGEICIKGTNVFKGYFKEPEKTKETLD
EDGWLHTGDIGTFLPNGTLKICDRKKNIFKLSQGEYIAPEKIENIYIKSQYVAQVFVHGE
SLKSCTIAVIVPDVENVKFYAEERGIPGTLSVLCNMPEIKQLIMNDITDLGKKGGLKSFE
QVKDIYLHPDAFSVQNGLLTPTLKSKRPELRTYFKPQLEDMYMKLD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatcctctctgctgcgcacgccgtcgccgctggacccgttgtcgctttacagaaaatc
aaaggtccagatgtcgaacagtatttgcattatgtcagcggtgccgctggtatgttggca
atggccggagtcggtgtggcagccgcctcagcttattatttggccaaccggcctatcccc
acaacacctccgtttgatttggacaatcagacgattgtcgagggaccagaactcatacac
tattcccgcttcgccaaagacggcaaagaaatgaaattcatgcgctatctctacgaagac
acccggaccctgtatgacgtcttccggcgcggagcgcgtgtttcaaacaacggaccttgt
ttgggatggagagaggatcccaccaagcagtaccaatggatgcgctacgaagaaactctg
ttgcgcgcacagaatttaggctccggcctagtggctcttggcctcaagcccacgcccgac
acactggtgggcgtctacggtcagaacagtcccgaatgggtactcagcgaatatgccctc
tacagctactccatggtaattgtgccactttacgacacgctgggaccagaggcctgcaac
tacatcattaatcaagccgaaatgtcgctggttatctgcgacaacgaagacaaatgcaag
tcgttgctcaacaattcacccccgtgtctgaagcagctggtccatatgaaacccatctcg
caagagacgattgagttggccaagcgtaaaggcatcaacaccttgagcttcgactatgtc
gaaaagttgggagccgaaaagaaacacaggcctgtgccacctagaccagaggacttgagc
accatttgctacacatcgggaacgacgggcaaccccaagggagtcatgctgacccacgag
aatgtcgtggctgacgtcagcgccacgctactccaattgggtgaccagaaacccaactgc
tcggacgtgatgatgtcctttttgccgttggcacacatgttggaacgcatttgccaaatc
gccgtgtacatgcaaggaggcgccattggcttcttcggcggtgatgtccgtaatttgatg
gacgacatgaaagccctgagacccaccatcacgccggccgtgccccgcctgctcaaccgc
atcttcgacaaggttcagagcggtttgaacagctcgtcactcaaacgcttcctcttcaac
gcagccctcagctccaaggagaacgagctgagacgtggaatcatccggaataacaccatc
tgggataaactcgttttgggaaaagttcaagacagcatgggcggacgcatccgtcttttg
gtcgttggctcggctccattggctggctccgttttgacttttatgcgttgcgccctaggc
tgcgtcattgtggaaggttacggacagaccgagtgcgtcgctccgacgaccttaaccgtt
cagggagattctacaccagaacacgttggacccccaattccttgctgcgcaatcaaattg
gttgacgtacccgatatgaattactacgccgccagtggacacggtgaaatctgcatcaag
ggcaccaatgtcttcaaaggttattttaaggaacccgaaaaaaccaaagagacgttagac
gaagacggatggcttcacactggtgacatcggcacctttttacccaacggaacgttaaag
atttgcgatcgcaagaaaaacatcttcaagctgtcacagggcgaatacatagcccccgaa
aagattgaaaacatttacatcaaaagccaatatgtcgcacaagtctttgttcacggtgaa
agcctcaagtcgtgcacgatagcagtcatcgtgcccgatgttgaaaacgtcaaattttac
gccgaggagcgaggtattcccggaacactttcggtcctctgcaacatgcctgaaatcaag
cagcttatcatgaacgacatcacagatctggggaaaaaaggcggtctgaaatccttcgaa
caggtcaaagatatctacttgcacccagatgccttctcagtacagaatggtttgttgacg
cccactctcaaatctaagcgtccggaactccgtacttacttcaaacctcaactcgaggac
atgtacatgaaattggactaa
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