Daphnia pulicaria: 124311043
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Entry
124311043 CDS
T08670
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog isoform X1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
dpz
Daphnia pulicaria
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_Zer-1
LRR_5
Motif
Other DBs
NCBI-GeneID:
124311043
NCBI-ProteinID:
XP_046631260
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Position
8:complement(8646265..8650709)
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AA seq
630 aa
AA seq
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MRKTPKNRNTEFPPSAAAAERLADYKGEGNPLGVANLTSPELDIHPILPLSEMPEVNEGN
PVPSSSSSSKDNKTGFAKSPQAQAHCQPRVIEKKLSSGSLSSGGCDGARPKVVTVKHPES
NKPKPTVKKNKPIQADLDVAKEFTRCKEEGKSRLDLSKSSVTLLPPSVRELTHLTEFYLY
GNKLACLPPEIGCLVNLSTLALSENSLTGLPDSLANLRCLRVLDLRHNKLHDIPDVVYKL
HSLTTLFLRFNRIRVVGDEIRQLTHLTMLSLRENKIRELPAGIGRLTNLITFDVSHNHLE
HLPEEIGNCVQLSSLDLQHNELLDIPESIGQLRNLNRLGLRYNRLTSVPRSLSNCVHMDE
FNVEGNAISHLPDGLLSSLSQLTSITFSRNSFTAYPSGGPSQFINVHSINLEHNQVDKIP
YGIFSRAKHLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQLNKVPDDIALLQSLEVLI
LSNNNLKRVPNSIGNLRKLRVLDLEENKLETLPNEIGFLRDLKKLIVQSNQLTSLPRAVG
HLSNLTYLSVGENNLSYIPEEIGTLETLESLYLNDNLNLHNLPFELALCSSLQIMSIENC
PLSQIPAEIVGGGPSLVIQFLKMQGPYRSM
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaactcccaagaatcgaaacaccgaatttccaccttcagctgctgctgctgag
agattagctgattacaagggtgaggggaatccacttggtgtggcaaatcttacttctcct
gaattggacattcatcccatcctaccactaagcgaaatgcccgaagtgaacgaaggaaat
cctgtcccgtcgtctagttccagttccaaagacaacaagactggttttgctaagtctcca
caagctcaagctcattgccaaccaagagtcattgaaaagaagctctcttcgggctcttta
agttctggaggctgtgatggagcgcgcccgaaggtggtcactgttaagcatccagaatcg
aacaaacccaaacccacagttaaaaagaacaagccaattcaagccgacctggatgttgcc
aaagaatttactcgttgtaaagaagaaggaaaatcacgactggacttatctaaatcaagt
gtgactttgctacctccttctgtccgggaactcactcatctgaccgaattctacctctac
ggaaacaagttagcatgtctgcctcccgaaattgggtgtctagtaaacctttcgacattg
gcactcagtgaaaattccctgacaggcctgccagatagtttagcaaacttgcgctgtcta
cgcgttctcgatctgcgacacaacaaattgcatgatatccctgacgtagtttacaagcta
cattctttgactacactctttttgcgctttaaccggatccgtgtggttggtgacgaaatt
cgtcaactcactcatttaaccatgctgagccttcgtgaaaacaaaatccgcgaactgcca
gcaggaattggtcggctgaccaatttgatcacctttgatgtgtcccacaaccacttggag
catcttcccgaagagattggcaactgtgtccaactatcgtcactggatttgcagcacaat
gagctcctagatattcctgaaagcattggtcaacttcgtaatctcaatcgactgggcttg
cgatataatcgtctgactagtgtacccagatccctgagtaattgtgtgcatatggacgag
ttcaacgtcgagggcaatgcgatttcccatctccctgatggccttttgtcttcactcagt
cagttgacgtccatcaccttttcacgcaattcttttaccgcttatccttctggtggaccg
tcccagtttataaacgtacatagcatcaacctggagcacaaccaggtggacaaaattcct
tacggtatattttcccgagccaaacatttggccaaactgaacatgaaagagaatttatta
acgtcgttgccattggatattgggacgtgggtcaacatggtcgaacttaatctcggtacc
aatcagcttaacaaagtccccgatgacattgcccttcttcaatctctcgaggtattgatc
ctgtccaataacaaccttaagcgagtgccgaacagcattgggaatttgcgaaagttgaga
gtgctagacttggaggagaacaaacttgaaaccctgcccaacgagattggatttttgcgt
gacttaaagaaactgatcgtccaatcgaatcaactcacttcattgccacgggcggtaggc
catctttctaatttgacctacctgagtgtaggtgaaaataatctatcctacatcccggag
gaaattgggacgcttgagacattagaatcgctttatctgaacgacaatctgaatttgcac
aacttaccatttgaattggccttgtgttccagtctacagattatgagtatcgagaactgt
ccattgtcgcagattccggctgagatcgtggggggaggtccatctctagttattcagttc
ctcaagatgcaaggcccttatcgttctatgtaa
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