Daphnia pulicaria: 124311066
Help
Entry
124311066 CDS
T08670
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124311066
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124311066
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
Pre-60S particles
Helicases
124311066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124311066
NCBI-ProteinID:
XP_046631306
LinkDB
All DBs
Position
8:12967770..12980983
Genome browser
AA seq
594 aa
AA seq
DB search
MKTEWNELGVKLSEPILRTLKDLNFTKTTPVQAACIPLLLQKKDVCAEAVTGSGKTLAFI
IPILEILLARSTPLKKHEIGALIISPTRELASQIDEVLTKFLINLPQFTHLQMIGGAHTV
VQDIKDFTSHGAHIIITTPGRFMDLLIRQGDHINLAGGLKSLEILILDEADRLLDLGFHA
TLNTILGFLPKQRRTGLFSATQTREVESLARAGLRNPVAVTVKEKNLNNDGSRTPASLAN
YYMVVEGDQKLAVLITLMKTKAPGKFMVFMSTCAAVEYFSLILKHFLPSVTVMSIHGKLK
TTRFKIFDKFRSLKTTGLLVCTDVMARGIDIADIDWVFQFDAPSCASDFVHRCGRTARIG
NRGTALAFLQPNEEPYVHFIDINQKVKLTHMELPDDLPVNLAEIRQMQQNDRALMDKATR
AFVSYIHSYVKHECSVLLRVKDLDFGRLAVGFGLLTLPKMPELKNRKTDFFQPVSIDLNL
ITYKDKAREKIRQEKLAIYRETGVWPSSKANSGPMKKNESWSEKKAQKCRKKEKKKLRVE
QKKRKRAAVDEDEWNELARDARLLKKLKKRKISEKSFEKQFNNKTEAAAPAEEA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagagtggaatgagttgggtgttaaacttagcgaaccaattcttcggaccttg
aaagatcttaacttcacgaaaacaacacccgttcaagctgcatgcatacctctgttgctg
caaaagaaagatgtttgtgctgaagcagtcacaggctcaggcaaaacattggcattcatc
attcccattttagaaattttgctggcacgatctacaccactgaaaaaacatgaaatcggg
gcccttataatatcccctacaagagaattggcatcacaaattgatgaagttttgacaaag
tttctaattaacttgccccagtttacccaccttcaaatgattggaggtgctcatactgtt
gtacaagatattaaagactttaccagtcatggagctcacattattatcactacacctggg
cgctttatggatcttcttattcgacagggtgaccatattaaccttgctggaggactgaag
tcattggaaattctcatcttggatgaagcagatcgtctgttggacctgggatttcatgct
accttgaacacaatattgggttttcttccgaaacaaagaagaacaggtcttttctctgct
acccaaactagagaggttgaatcattggctagagctgggttgagaaatccagtagcagtt
acagtgaaagaaaagaatttgaacaatgatggttcaagaacaccagcttccctggccaat
tattacatggtggttgaaggggaccagaaattagctgttttgataactttgatgaaaacc
aaagctcctggcaaattcatggttttcatgtcaacttgtgcagccgttgaatatttttca
ctcattctaaaacattttttgccttcggttactgtgatgagtattcacggaaaactgaaa
acgacccgcttcaaaatctttgacaagttcagaagcctcaaaaccaccggactgttggtt
tgcactgatgtcatggcccgcggtatcgatattgctgacatcgactgggtgtttcagttc
gatgcaccttcgtgtgcatcggatttcgttcatcgttgcggaaggactgcccgaatcggt
aatcggggaacagcactagcctttctccaacccaatgaagagccttacgtccacttcatt
gacatcaaccaaaaggtgaagttaacccatatggaattgcctgatgacctgcccgttaac
ttggctgaaattcgacaaatgcagcagaacgatcgcgcactgatggacaaggccactaga
gcgtttgtttcttacatacactcttacgtcaaacacgaatgttccgtactacttcgcgtc
aaagatttagattttggtcgtttggccgtaggtttcggtctccttacactcccgaaaatg
cccgagctcaaaaatagaaagacggatttctttcagccggtcagcattgatctcaacttg
atcacctacaaggacaaggcccgagaaaagatacgacaagagaaattagccatctaccgc
gagacgggagtttggccgtcatcgaaagccaattccggaccaatgaagaaaaacgagtcc
tggtcggagaagaaggcacagaaatgtcgcaagaaggagaagaaaaagctcagagtggaa
cagaagaaacgtaaacgtgctgccgtcgacgaagatgagtggaacgagctggcccgtgac
gctcggctcctcaagaaattgaaaaagcgaaagatctccgagaaatctttcgagaaacag
ttcaacaacaaaaccgaggctgctgcacctgccgaagaagcgtga
DBGET
integrated database retrieval system
