KEGG   Daphnia pulicaria: 124311076
Entry
124311076         CDS       T08670                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
dpz  Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpz03019]
    124311076
   04121 Ubiquitin system [BR:dpz04121]
    124311076
Enzymes [BR:dpz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124311076
Messenger RNA biogenesis [BR:dpz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124311076
Ubiquitin system [BR:dpz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124311076
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP RING_XB3-XBAT31 KH_2 KH_BICC1_1st Prok-RING_4 KH_DEAH11_2nd
Other DBs
NCBI-GeneID: 124311076
NCBI-ProteinID: XP_046631321
LinkDB
Position
8:complement(12418088..12424333)
AA seq 585 aa
MPASASYGESIELTRHNSLEDQRALQVAMELSLLSFGNNMDYHHVDHHSTSPNHHHYNTM
DHINSLHYADEMRFLAKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPV
RGEEPVFVVTGRKEDVAAAKREILSAAEHFSQIRASRRSGLVGQCGIVGTTGLVPPPPVP
GQVTIQVRVPYRVVGLVVGPKGATIKRIQQQTSTYIVTPSREKEPIFEVTGMPDNVEQAK
REIEAHIALRTGLVNVDGSGNELSPDMMHDLAAGLNGLGLGMLGSSLGGGLDNGTADLMG
SLYKTSSSALRSAFSGHHNLNNDVYGVTSSGLSNLLGDNAFGLRSHNSYGVSNAPSAAGK
IDSELQTLGSGLLNSLYDSDEGIGLGGSDSPTLSHSLIQPNIWSTDFGTGLVGGGSTSSI
NTNSTSSATTSNSGSTGAKRSNSFGFPTSDSDHPPARRISSDPLTAIGSTLNSLSAAFQI
RSDSDSGVRDSSASASGSASPAACSPVGSSSNSSTRGSLKRECIMCCEGEMVAALVPCGH
KLFCMDCAQRLVPKESSAEADSPSSAGGECPVCHQSVTQAIRIFS
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgccggccagtgcatcgtacggcgagtcgatcgagttgacgcgccacaattcgctggaa
gaccaacgagccctgcaagtggcgatggaattatccctgctcagtttcgggaacaacatg
gattatcaccacgttgatcaccattcgacatcgcccaatcatcatcactacaacacgatg
gatcacatcaactcactgcactacgccgacgagatgagattcttggccaaaaagagtcaa
aatatgaccgagtgcgtcccagtccccagttcggaacacgtcgctgaaatcgttggaaga
caagggtgtaaaatcaaggctttgagagctaaaaccaacacttacatcaagacgccggta
cgtggagaagaacccgtttttgtcgtcactggtcgtaaagaagatgtcgctgctgccaaa
agagagattctgtcagcggccgaacatttctcacaaatcagggcctccagacgttcagga
ctcgtaggccaatgtggcattgtcggcactactggactcgttcctcctccaccagtccct
ggccaagtcaccattcaggttcgtgtaccgtatcgagtcgttggtcttgtcgtcggccct
aaaggagctaccatcaagcggattcaacaacaaacgagcacctacatagtcacaccgtcc
agggagaaggagcccatttttgaagtgacgggcatgcctgataatgttgaacaagccaag
agggagattgaggctcacatcgctctacgcactggattggttaatgtggatggttcaggc
aacgaattatccccggatatgatgcacgacttggctgccggattaaacggactaggattg
gggatgcttggatcgagtctgggtggcggtctggataatggaacagctgatttgatggga
tcgctgtacaagacttcgtcatcggcacttcgctctgccttttcaggacatcacaacctc
aacaacgatgtttacggagtgacttcatctggtctgtcaaatttgcttggagacaacgct
ttcggtctgcgatcccacaactcttacggcgtatccaatgctccatctgctgctggaaaa
atcgattctgaattgcaaacactcggcagcgggttgctcaatagcttgtacgattcggat
gagggtatcggactgggaggatcggattcgcctactttgagccattcgttgattcagccc
aacatctggtctacggatttcggcaccggattggtcggaggtggcagcacgagctctatc
aacacaaacagcaccagcagtgccacaaccagcaacagcggcagcactggagccaagagg
agcaatagctttggattcccgacttcggattctgaccacccaccggcccgtcgcatcagc
tctgacccgttgacggccattggatcgacactcaattcgttgtctgcagccttccagatc
cgttcggattccgattctggtgttcgtgattcttccgcatcggcttccggttcggcttct
ccagctgcctgctcaccggttggttccagcagcaattccagtacgaggggatcactcaag
cgcgaatgcatcatgtgctgcgaaggtgagatggtggctgctcttgttccatgtggtcac
aagcttttctgtatggattgcgcccagcgtttggtgcccaaggagtcgtctgctgaagct
gactcaccatcgtcagccggaggagagtgcccagtctgtcatcagtccgtcactcaagcc
atcaggatcttctcgtaa

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