Daphnia pulicaria: 124311242
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Entry
124311242 CDS
T08670
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dpz
Daphnia pulicaria
Pathway
dpz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124311242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124311242
Spliceosome [BR:
dpz03041
]
Common components
Common spliceosomal components
SR proteins
124311242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
124311242
NCBI-ProteinID:
XP_046631606
LinkDB
All DBs
Position
8:12140270..12144702
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AA seq
385 aa
AA seq
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MGTRVYIGGLPYRVKERDIERFFRGYGKLREVLIKNGYGFVEFEDYRDADDAVYELNGKE
LCGERVTVERAKGSPRARGRGSSGGSDSGRSPRNGREHGRSGFRNSSNSRSGGKGGGDNA
PPRYGPPTRTDYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSD
LKTAIEKLDGTDLNGRRIKLVEDKDSGRRGSRRRSRSRSSSRSRSRSRSRRRSRSRSRSR
SKSRSRSKRSGSKSRSRSKSRGHSKSKSKSRSRSPRKSRSKSRSRDKSIDRSKSKSHSRS
PRKSRSKSRSRDKSVDRDRSVSRDKSVERAASKQSRSKSRERSHSRSRSRSVSRSRSASG
SPRRDDRDEDEKMDNGHRSSPDNRD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcgcgtttacattggtggcttgccataccgagtcaaggagagagacattgaa
aggttttttcggggctatggaaagcttcgagaagtcctaattaaaaatggctacggcttt
gtggagtttgaagactatcgggatgctgatgatgcagtgtacgagctaaatggaaaagaa
ctttgtggggaaagagtgaccgtggagcgagccaaggggtcgccgcgggcacgaggtcgt
ggatcatctggcggttccgatagtggccgaagtccccgcaatggccgcgaacacggccga
tctggtttccgcaactcctccaactcgcgatcgggaggaaagggtggtggcgacaatgct
cctccgagatatggcccacccaccagaacagattaccgtctagtggttgagaatctgtcg
agccgagtcagttggcaggatctcaaggattacatgaggcaggctggtgaggtcacctac
gcagatgcccacaagcaacatcgcaatgaaggtgtggttgagtttgcgtcatattccgat
ttgaagacagccattgaaaagttggatgggacagatttaaacggaagacgaatcaagctt
gtcgaggataaagattcgggtagacgcggttctcgccgtcgttcccgctctcgctcatca
tcgcgctcccgttctcgttcccgctcacgtcgtcgctcccgttctcgctccaggtccaga
agcaagagccgcagtcgttcaaagaggtctggaagcaaaagccgcagccgctccaaatct
cgcgggcattcgaagtccaagagcaagtcccgttcgcgttctccgagaaagtctcgatcc
aagtcgaggtctcgcgacaagtctattgatagatcaaagagcaagtcacactcacgttcg
ccaagaaagtctcgctccaagtccaggtctcgtgacaagtcagtggatagagatcgttct
gtatctcgtgacaagtctgttgaacgcgctgcatcgaaacagtcgaggagcaagtcaagg
gagagatctcattctcgatcccgttcacgatcagtatctcgcagccgatctgccagtggc
agtccacgcagggatgatcgtgatgaagacgagaaaatggataatggacatcggtcaagt
cccgataaccgcgactaa
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