Daphnia pulicaria: 124311537
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Entry
124311537 CDS
T08670
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
dpz
Daphnia pulicaria
Pathway
dpz03018
RNA degradation
dpz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124311537
09123 Folding, sorting and degradation
03018 RNA degradation
124311537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124311537
03041 Spliceosome [BR:
dpz03041
]
124311537
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124311537
mRNA degradation factors
5'-3' decay
Lsm complex
124311537
Spliceosome [BR:
dpz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124311537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
124311537
NCBI-ProteinID:
XP_046632026
LinkDB
All DBs
Position
8:complement(11317742..11318288)
Genome browser
AA seq
89 aa
AA seq
DB search
MAAPVPTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMVLEDVSEFESTPEGR
RVTKLDQILLNGNNITMLVPGGEGPEAHS
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccggtacccacgcttttacctctggagttggttgataaatgcattggttca
aggatccacattatcatgaagaatgacaaggaaatagtgggaactttgctagggttcgac
gattttgtcaacatggtgctggaagatgtgtcagaatttgaatctactccagaaggaaga
cgtgtgactaagctagaccagatcctgttgaatggaaacaacataactatgttagttcct
ggtggagagggaccagaagctcattcatga
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integrated database retrieval system
