Daphnia pulicaria: 124311769
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Entry
124311769 CDS
T08670
Name
(RefSeq) DNA mismatch repair protein Mlh3-like isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
dpz
Daphnia pulicaria
Pathway
dpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124311769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124311769
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124311769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
124311769
NCBI-ProteinID:
XP_046632062
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Position
8:135880..140147
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AA seq
933 aa
AA seq
DB search
MVSQYFTMKRSSCRQIPLTLEAVWNKLMLRFMTGREYQITGFLFFFQVLTLVTLVSEETV
VFLQTLFIHAPCVACGWTGSGKELYGWNRWISWICKDLRVPILSMRRLLFMLLTPDPHRL
SSICFILMFFPVSKPVSRTFPKFLMEYKNWPSDGVSSTCLEKDLFTFEYWLVLNSIHGNA
TCIAVRLDWMSRFLQVVDNGRGIGSTQLQLFCSRNNQNVENVVVDKHLEEALHLIIKHCS
SLEIESQVKNSSVSYKRLYQNGIWRNVECVGTRSTSGTTVSVFDFFRPPSSEETFDFDYL
SLEKLIASFFLLHSHISFSLRVDPSKPPSLQTKKAKNTMLAAQQLFKSESIIPFRGSSRH
FKVKGLFINHPGESSWFIFVNSQLVESKEIVDLITSVLSNLTSSQEQRFAIILNIKCSRT
VCKFTVDSNGNRGVAFLNWNELLSLIQSSLDQFISHAPIKKTAFVSRWLIAAYGDGNSTT
SPLTIKSLDFYPPQQEIKTETSKISSPFRCEQSGSSDQSFYGKITNSIPIPLVSHAPENL
EMRVKESPNVCRVSSPPLLLSPNHLASLWEEVEEAAENTQLIQEPENGNLENVVSIPPDM
GTSTSTCNLQEKDNTQIEDRSSLDSSNRLALKRRYVSTDSDNRFNSKREFKIGRNYPTNA
FWVQPKMPPNLAVKNLSSLFASALQKECTFTKSVMGNIHVVSQVDRKFICCITREDEKRY
LVLIDQHAAHERVCLERLMQMHSTKNDDGYIQVLSSPLHPHLQLTFPIGDLQLIQKLSVE
FTRFGLHLQFTDSTVSATRVPSCFLARETNEIQRKRSSLYKDLVVALIDETIAEFTKNGR
LSSCLLPAQIRNVLNSLACHGAIRFGDELTLTQCSQLVKALGQCDVPFQCAHGRPLLAPL
LEIGDLNGLTPSLITPDSTKPKYVRLMEYGELT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggtttcacaatatttcacaatgaaacgctcaagttgtcgtcagatccctctgacttta
gaagctgtttggaataagcttatgctgcggtttatgactggacgggaataccagattact
ggtttcctttttttctttcaagtccttacacttgttacactcgtttctgaggagacggtg
gtttttctacaaacattgtttatacatgctccttgtgtagcttgcggctggactggatct
gggaaggagttgtacggctggaatcgctggataagctggatatgcaaagacctaagggtg
ccgattttaagcatgcgacgccttttatttatgctactcacacccgacccccatagatta
agctccatttgctttattttaatgttttttcctgtttcaaaacctgtttctagaactttc
ccaaaatttctcatggagtacaaaaactggccgtcagatggcgtttcaagcacatgtctg
gaaaaagatttgtttacgtttgagtactggttggtgttaaattcaattcatggcaatgca
acctgcatcgctgtacgccttgattggatgagtagatttttacaagtagttgacaatgga
agaggaattggatcaacacaacttcagctgttctgttcaagaaataatcaaaatgttgaa
aacgtggttgttgataaacatctagaagaagcattacatttgattatcaaacactgcagt
tctcttgaaatagagagccaagtgaaaaactcaagtgtgtcgtacaaaagactttaccaa
aatggaatttggcgcaatgttgagtgtgttggaacaagatctacatcaggaacaacagtg
tctgtttttgatttttttagaccaccatcatcagaagagacatttgattttgactatcta
tcgctagagaaactaattgcaagcttctttttactgcattcacacatatcattctcactg
cgagttgatccttccaaacctccttctcttcaaactaagaaagcgaagaacacaatgctt
gctgctcaacagttgtttaaatctgagagcataataccgtttcgtggctcaagtcggcat
ttcaaagtgaaaggtctattcatcaatcatccgggagaaagttcctggtttatatttgtt
aacagccagcttgtcgaatccaaagaaattgttgatttgatcacatcggttttatcgaat
ctaacttcttcccaagaacagcgtttcgctataattttgaacatcaagtgttcccgaact
gtatgcaaatttaccgttgattcgaacggcaatagaggagttgcgttcttaaattggaat
gagctgctatcgttgattcagagttcgctcgatcaatttatttctcatgctcccataaaa
aagacagcgttcgtatcgcgttggcttatcgccgcttatggtgacgggaattcaacaacc
tcacctctgacaatcaaaagtttagacttctaccctcctcaacaggaaatcaaaacagaa
acctcaaaaatttcttcgccattccgttgtgaacaaagtggttcttcggatcaatcgttt
tatggaaaaatcactaattcaattccgattccactcgtgagccatgcaccagaaaacctc
gaaatgcgggttaaagaatctccaaatgtctgtcgggtttcctctccgccgttgttacta
agtccaaatcacctcgctagtttatgggaagaggttgaagaagcggcagagaatactcaa
ctgattcaagaaccggaaaatggcaacttagaaaatgtagtttcaataccccctgatatg
ggaactagtacctcaacttgcaatctgcaagaaaaagataatacccaaattgaagaccgt
tcttccttggattcttcaaatcgcctagcgctcaaaagaagatacgtctcaactgatagc
gacaaccgtttcaactctaaaagagaattcaaaattggccgaaattatcccacaaatgcg
ttttgggttcaaccgaaaatgccaccgaatcttgctgtcaagaacctcagtagcctgttc
gcatcggcgttgcaaaaggaatgcacattcacgaaatctgtgatgggaaacattcacgta
gtcagtcaagttgaccgaaaattcatctgctgcatcactcgagaagacgagaaacgttat
ctcgtcctcatcgatcaacatgccgctcatgagcgagtttgcttggaaaggcttatgcaa
atgcattcaaccaaaaatgatgatggctacattcaagttttatcttcgccacttcacccg
catctccagttgacatttccaatcggagatctgcagttaattcaaaagttaagcgtcgaa
tttactcgtttcggcttgcatctgcaattcaccgattcgactgtttcagcgacccgtgta
ccttcttgttttttggcaagagaaacaaatgagatccaaaggaaaagaagttcgttgtac
aaagacttggtggtggccctcatcgacgagactattgcagaattcacaaaaaacggaaga
ctttccagctgcttattgcctgcacaaatccggaacgttttaaattcattggcgtgtcat
ggtgcgatcagatttggtgatgaactaactctgacacaatgctcacaattggttaaagct
cttggccaatgtgatgtgccattccagtgcgcacatgggcggcctctcctggccccattg
ctggaaattggcgaccttaacggactgaccccatcgctaataactcctgacagtactaaa
ccaaagtacgttcgtttgatggagtatggcgaactgacataa
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