Daphnia pulicaria: 124312014
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Entry
124312014 CDS
T08670
Name
(RefSeq) DDB1- and CUL4-associated factor 12 homolog
KO
K11803
DDB1- and CUL4-associated factor 12
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124312014
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124312014
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF12
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
DUF7411
Motif
Other DBs
NCBI-GeneID:
124312014
NCBI-ProteinID:
XP_046632358
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All DBs
Position
8:4197079..4199375
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AA seq
462 aa
AA seq
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MARVVKKAVYGTLPSSVRVQQPSQRDSSRINPVQNNINLDREDSQSESSSSSGNSSVECS
PRRRDEFLRYEDSDEEETYPTSSKISHSFVDLVSQRSLGHGHPASVNWEYGTRHLLTNGN
FREHQIQLGEMNKIFCSQWLNGHQIVFGSKCNRLSVYDLNKKELFSIPLLRSLQNRQPES
QCGIHALAINPSQTVLATGAENTNDIAFYSLPTFDPLAIGEGAHSDWMFDLKWLDDCFLV
SGSRDTKMALWKLEDVYHPTVINFKALAVKRCKTAEKVRALAFNKRDVEIAALSLNGYIH
LWKADTFKQTGSQKLHYGMENVCLGYQEERNLYAVGSRSHTTILDARSLQQIQNKNIASL
YPTCGIRSVSFRGDILTIGTGTGSILFYDLRTSKYMLYKDTTREIVFKTNTGWVAADDSP
QVMARYTPAIYTHCYDGSGTRLFAAGGPLAVERRGNYAAVWS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagtggtgaagaaagccgtttacggaacgttaccaagcagtgttcgagtgcag
caaccttcacaaagagattctagcagaattaatcctgtgcaaaacaatatcaatttggat
agggaagattcacagtcagaaagcagctcttcgtctggtaacagttcggtcgagtgcagt
ccaaggcgaagggacgaattcttacgttatgaagatagtgacgaagaggaaacgtatcct
acttctagcaaaatctcacacagttttgtcgatctggtatcacagcgctccctggggcat
ggtcaccctgccagtgttaattgggaatatggaacaagacatttacttacaaatggaaat
ttcagggaacatcaaattcagctgggcgagatgaacaaaatcttctgctctcagtggctt
aacgggcaccagattgtctttggttcaaaatgcaataggttatcggtgtatgacctcaat
aagaaggaattgttttccataccacttttgagaagcctgcagaacagacaacctgaaagt
caatgtggtatccatgcgttggctatcaacccttcccagactgttctggccacaggcgca
gaaaacactaatgacatcgccttttattcgttaccgacttttgatccgctcgccatcgga
gagggtgcgcacagtgactggatgttcgaccttaaatggctggatgactgtttcctcgtt
tcgggctcgagagacacgaagatggccttgtggaagctggaggatgtgtatcatccaaca
gtgattaatttcaaagctctggccgtcaaacgttgcaaaacggcagaaaaagtgcgggcg
ttggctttcaataaaagggacgtagaaatcgccgctcttagtcttaacggctacattcat
ttgtggaaggctgatactttcaaacaaacggggtcacaaaaactacactacggaatggag
aacgtctgtcttggataccaagaagagcgcaacctgtacgctgtcggttcccgctctcac
acgaccatattggacgctcgcagtcttcagcaaatccaaaataaaaatatagcttctctt
tatcctacttgtggcatccgatccgtcagttttcgtggggacattttgacaattgggacg
ggaactggatcgatcctgttctacgatttgcggacttctaagtacatgctttataaagat
acgactagagaaattgtctttaaaacgaataccggctgggtggcagcagacgactccccc
caggtcatggcacgttacacacctgccatttacactcactgctacgatggaagtggaact
aggctctttgcagctggcggaccattggcggttgaacgccgaggcaactatgcagccgtc
tggagttga
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