Daphnia pulicaria: 124312102
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Entry
124312102 CDS
T08670
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124312102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124312102
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124312102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
124312102
NCBI-ProteinID:
XP_046632530
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Position
8:13927111..13929650
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AA seq
559 aa
AA seq
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MRSWFHEQLLARAIASAVWTTVLQVPLVLGLKLLFSGYQGLWNSFSLFLHYGSIFSLLMI
PLCICGFTFTHLKCYRAEPLVFSTRWAVLKQLSSPSFLLLLAWYFNITGVLMNSYFAMAL
PFLGSLSTQCSERQEWCLNEPHLFGVFFGCWLGLCEAGDYFFSDRRIVKVPHVQLNIKVA
VRSSISSLIKNSLSVSFKRYVVYIFLYLLFGGFVRSYILAVTRLAMDEPLDTFVTLINIS
LALRCILIGSACVFTIRLSDLFFQLYQIKPISFPLLRLVDETTPLLQESLSSNSALLRLW
ACRDWSILAEHSSEQRSVIFSVSQPGNHPHNWNNIFSAIQPQCLHFISLLKGENKTAKTE
KKEMPAPQSPAPYDTFSSPVRMRSMALTSPSKVSDSPSLPKSTLQCKIQSKLQEALENLK
KKPVINFLWGELPDAKRRQTFAKAEPIILLVEGLSHFVAASFVEDKFGVVQKDLPEILSM
LLDLQAAVEQRGPPSGAITKRTEAFTSSPTDVQLKYRLKRAIKSSIYRIVVRFQLHILNV
PLPPTQKRMLEQYLEFIVG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctggtttcacgaacagttattagctagagcaatagcatcagcagtatggacc
acagtcttacaagtgcctctagttcttggactgaagttattgtttagtggataccaagga
ctgtggaactctttttcgttgttcctgcactatggctccattttcagtctccttatgatt
ccactttgtatctgtggatttactttcactcatcttaaatgctacagagctgaacctttg
gtcttttccacacgatgggctgttctgaagcagttatcaagcccgtcttttcttcttctc
cttgcttggtacttcaacattactggagttctcatgaattcatattttgcaatggctctt
ccttttctgggatcattgagtacccaatgttctgaaagacaagagtggtgcctcaatgag
ccccatttgtttggtgtattctttggctgctggcttggcttatgtgaagctggggactac
ttcttttctgatagaagaattgtaaaggtaccccacgtccaactaaacatcaaagtagct
gtcaggtccagcatctcttctctcatcaagaactctttgagtgtttccttcaagagatac
gttgtgtatatatttctttacttgctctttgggggcttcgttcgctcctatattctcgcc
gtgacgaggcttgcaatggatgaacctctggatacatttgtcacattgataaacatctct
ttggcacttcgatgcatcctcatcggatcggcttgtgtttttaccatcagactttctgat
ttgtttttccaattgtatcagataaagccgatttcttttcctcttctacgcttggttgat
gagacgacacctttgcttcaagagtctctgtcttcgaattccgctctacttcgattatgg
gcttgcagagactggagcatcttggccgagcatagttcagaacagagatctgtaattttc
tccgtcagccagccaggaaatcatccccacaactggaataacatattttcagcgattcaa
cctcagtgtctccatttcatttcactgctcaaaggtgaaaacaaaactgccaagacagag
aaaaaagaaatgcctgctccacaatctccagcaccttatgatacgtttagtagccccgta
cgaatgcgcagcatggctctgacctctccatctaaggtgtcggattcaccttctctgccc
aaatctactttgcaatgcaaaatccagtctaaattgcaggaggcgctagaaaatctcaaa
aagaagcccgtcattaacttcttgtggggagagctcccggatgctaaaagaaggcaaacg
tttgctaaagctgagccgatcattctacttgttgaaggactttcacatttcgtggcggct
tctttcgttgaagataaatttggagtagttcaaaaagatctacctgaaattctttctatg
cttctggacctgcaggcggctgttgaacaacgcggaccacctagtggcgcgataaccaag
cgaacggaagcttttaccagttctccaacagatgtccaactgaaatatcgtctcaaacgg
gcaatcaaatcctccatctatcgcattgttgttcgatttcagcttcacattttgaatgtt
ccgctgccgcctacccagaaaaggatgttggaacaatacttggaatttatcgtcggctaa
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