KEGG   Daphnia pulicaria: 124312102
Entry
124312102         CDS       T08670                                 
Name
(RefSeq) nucleoporin NDC1-like
  KO
K14315  nucleoporin NDC1
Organism
dpz  Daphnia pulicaria
Pathway
dpz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124312102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpz03019]
    124312102
Messenger RNA biogenesis [BR:dpz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124312102
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 124312102
NCBI-ProteinID: XP_046632530
LinkDB
Position
8:13927111..13929650
AA seq 559 aa
MRSWFHEQLLARAIASAVWTTVLQVPLVLGLKLLFSGYQGLWNSFSLFLHYGSIFSLLMI
PLCICGFTFTHLKCYRAEPLVFSTRWAVLKQLSSPSFLLLLAWYFNITGVLMNSYFAMAL
PFLGSLSTQCSERQEWCLNEPHLFGVFFGCWLGLCEAGDYFFSDRRIVKVPHVQLNIKVA
VRSSISSLIKNSLSVSFKRYVVYIFLYLLFGGFVRSYILAVTRLAMDEPLDTFVTLINIS
LALRCILIGSACVFTIRLSDLFFQLYQIKPISFPLLRLVDETTPLLQESLSSNSALLRLW
ACRDWSILAEHSSEQRSVIFSVSQPGNHPHNWNNIFSAIQPQCLHFISLLKGENKTAKTE
KKEMPAPQSPAPYDTFSSPVRMRSMALTSPSKVSDSPSLPKSTLQCKIQSKLQEALENLK
KKPVINFLWGELPDAKRRQTFAKAEPIILLVEGLSHFVAASFVEDKFGVVQKDLPEILSM
LLDLQAAVEQRGPPSGAITKRTEAFTSSPTDVQLKYRLKRAIKSSIYRIVVRFQLHILNV
PLPPTQKRMLEQYLEFIVG
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgaggtcctggtttcacgaacagttattagctagagcaatagcatcagcagtatggacc
acagtcttacaagtgcctctagttcttggactgaagttattgtttagtggataccaagga
ctgtggaactctttttcgttgttcctgcactatggctccattttcagtctccttatgatt
ccactttgtatctgtggatttactttcactcatcttaaatgctacagagctgaacctttg
gtcttttccacacgatgggctgttctgaagcagttatcaagcccgtcttttcttcttctc
cttgcttggtacttcaacattactggagttctcatgaattcatattttgcaatggctctt
ccttttctgggatcattgagtacccaatgttctgaaagacaagagtggtgcctcaatgag
ccccatttgtttggtgtattctttggctgctggcttggcttatgtgaagctggggactac
ttcttttctgatagaagaattgtaaaggtaccccacgtccaactaaacatcaaagtagct
gtcaggtccagcatctcttctctcatcaagaactctttgagtgtttccttcaagagatac
gttgtgtatatatttctttacttgctctttgggggcttcgttcgctcctatattctcgcc
gtgacgaggcttgcaatggatgaacctctggatacatttgtcacattgataaacatctct
ttggcacttcgatgcatcctcatcggatcggcttgtgtttttaccatcagactttctgat
ttgtttttccaattgtatcagataaagccgatttcttttcctcttctacgcttggttgat
gagacgacacctttgcttcaagagtctctgtcttcgaattccgctctacttcgattatgg
gcttgcagagactggagcatcttggccgagcatagttcagaacagagatctgtaattttc
tccgtcagccagccaggaaatcatccccacaactggaataacatattttcagcgattcaa
cctcagtgtctccatttcatttcactgctcaaaggtgaaaacaaaactgccaagacagag
aaaaaagaaatgcctgctccacaatctccagcaccttatgatacgtttagtagccccgta
cgaatgcgcagcatggctctgacctctccatctaaggtgtcggattcaccttctctgccc
aaatctactttgcaatgcaaaatccagtctaaattgcaggaggcgctagaaaatctcaaa
aagaagcccgtcattaacttcttgtggggagagctcccggatgctaaaagaaggcaaacg
tttgctaaagctgagccgatcattctacttgttgaaggactttcacatttcgtggcggct
tctttcgttgaagataaatttggagtagttcaaaaagatctacctgaaattctttctatg
cttctggacctgcaggcggctgttgaacaacgcggaccacctagtggcgcgataaccaag
cgaacggaagcttttaccagttctccaacagatgtccaactgaaatatcgtctcaaacgg
gcaatcaaatcctccatctatcgcattgttgttcgatttcagcttcacattttgaatgtt
ccgctgccgcctacccagaaaaggatgttggaacaatacttggaatttatcgtcggctaa

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