Daphnia pulicaria: 124312376
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Entry
124312376 CDS
T08670
Name
(RefSeq) homeobox protein SIX1-like
KO
K15614
homeobox protein SIX1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124312376
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
124312376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
MATCAP
HTH_3
Menin
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
124312376
NCBI-ProteinID:
XP_046632835
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Position
8:complement(976009..980175)
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AA seq
474 aa
AA seq
DB search
MIVGPSAAGGMSDLVAHHHHMSGFAAHHHHHHMGLGGMMAAGMMPGMSSTSTGMTLPSQS
PPSSNNNNNNNNSSSSVGGTSSLSSGGNGGGGAALPSFGFTQEQVACVCEVLQQSGNIER
LARFLWSLPACDQLHKNESVLKAKAVVAFHRANFKELYKLLETHPFSPHNHPKLQALWLK
AHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYGHNPYP
SPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEHKDRVSGGSSAKDGGDGANDASALDE
SGSESLDGDGPDVAMATSSLASARHSAALLDTPSPPPPHHIQHHHHHHHHHQQQQQQQQL
NNMAAALANSLPHHGSNQDSLIGGGSIGDLYPDLKLASVYHTSHQLQMASAAAAAAAAAA
AAAAFGSPGHHVTSHHPSHADLAHSLLQQQQQQSTGPAQQQPTAHDYNNPHANS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcggtccgtcagctgctggaggcatgtccgacctggtggcacatcatcatcac
atgtccggctttgccgcccatcaccaccatcaccacatggggctgggtggcatgatggcc
gccggaatgatgccgggaatgtcttcgacgtcgacggggatgacgttgcccagtcaatct
cctccttcatccaacaacaacaacaacaacaacaattcgtcgtcttcggttggcgggacg
tcgtcgctgagttccggcggaaacggcggcggtggggcggccctgccgtcgttcggcttc
acgcaggagcaggtggcctgcgtctgcgaggtcctccagcagagcggcaacattgagcgg
ctggcccgtttcctctggtcgctgccggcctgcgaccagctgcacaagaacgagagcgtc
ctcaaagccaaggccgtcgtcgccttccaccgcgccaatttcaaagaactctacaaactc
ctggaaacccatccattctcgccgcacaatcacccaaaactgcaggccctttggttgaag
gcgcattacatcgaggcggaaaagttgcgcggacggccgttgggtgcggtgggcaagtac
cgggtgcgcagaaagttcccgctgccgcggaccatctgggacggcgaggagacgagctac
tgcttcaaggagaagtcgcgatcggtgctccgcgattggtacggccacaatccgtacccg
tcgccgagggagaagcgcgagctggccgaggccaccggcctgacgaccacccaagtctcc
aactggttcaagaaccggcggcagagagacagggccgccgagcacaaagacagagtgtcg
ggcggaagttcggccaaggacggcggagacggcgccaacgacgcttcggccctggacgaa
tccgggtccgagtcgctggacggagacggtcccgacgttgccatggcgacgtcgtcgctg
gcgtcggcgcgtcactcggccgccctgttggacacgccctcgccgccgccccctcatcac
atccaacaccaccaccaccatcatcaccaccaccagcaacaacaacaacaacaacaactc
aacaacatggccgccgcactggccaactccctcccgcaccacggcagcaaccaggactcg
ctgattggtggcggatcgatcggcgatttgtacccggacctgaaactggcgtccgtctac
cacacgagccaccagttgcaaatggcgtcggcggcggcggctgcggcggctgcggcggcc
gcagccgccgctttcggctcgcccggccaccacgtcacctcgcaccacccgtcgcacgcc
gatctggcccactctctgctccagcaacaacaacaacaatcgaccgggccggcccagcag
cagccaacggcccacgactacaacaatccgcacgccaattcgtga
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