Daphnia pulicaria: 124312603
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Entry
124312603 CDS
T08670
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19479
collagen type X alpha
Organism
dpz
Daphnia pulicaria
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
124312603
NCBI-ProteinID:
XP_046633034
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Position
8:complement(5836745..5838837)
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AA seq
507 aa
AA seq
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MVFKDSAQSMQVSVESEITEATHLSLTKGQLEFSCCQPVKNHEKQHRITMRGLTCIMVLV
ATACAAPKYRKHQEAITTEQWVSLNPYGSPDSYHNEEHSIIKDLENQWARFYEYLPWLRG
PTGATGPAGIAGPPGPPGTAAVYDPYYQPKLVPGPPGERGAPGPAGVKGDTGAPGSTGAP
GPQGNHGDDGAPGAQGMTGARGNDGATGAPGAPGYSGEKGEPGAPGAPGVNGAPGARGKD
GYNGAPGPSGPKGETGAPGVTVQSNVPGPVGAPGYPGKDGAPGAPGGPGPIGPVGTTGPQ
GPAGKDGSPGYPGSPGPKGEAGTRGYNGAPGKDGLNGAPGSIGPVGPQGPVGNPGYDGAP
GKDGSNGLTGAPGKDGYNGAPGAPGPQGEQGKTGKDGNPGGSGAPGGPGAPGSQGLQGKE
GPSGYPGSPGSVGPVGPVGPIGPIGPQGKPGTPGYPGGPGPVGPVGPVGPAGYQGKTGQT
GPPGPVGPIGPIGAPGHVTYAAPGRYH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggtatttaaagactctgctcagtcaatgcaagtcagtgttgagtctgaaatcaccgaa
gcaacacatttatcgctaacaaaagggcaactagaattcagttgttgtcaaccagttaag
aatcacgaaaaacagcaccggataacaatgagaggattgacatgtataatggtattggtg
gccacagcatgtgctgcacccaaatacagaaaacaccaggaagccatcacaacagaacag
tgggtttctttgaatccatatggctctccagactcataccacaatgaagagcactcgatt
atcaaagatttggagaatcaatgggcgcgtttctacgaatatcttccctggctgagaggg
cccacaggagctacaggacccgctggaattgcgggaccaccaggaccaccaggaaccgct
gcagtttatgatccttactatcaacccaaactcgttcctggccctcctggagaacgtggc
gcaccaggaccagctggagtaaagggagatactggcgcccctggatcaactggcgctccc
ggacctcaaggaaatcacggagatgatggagcacctggagcacaaggaatgactggtgca
agaggcaatgatggagctactggtgctcctggtgctcctggttactctggcgaaaaggga
gaacccggagctcctggagctccaggcgtgaatggagcacctggtgctcgaggcaaagac
ggttacaatggagcccctggaccttctggacctaaaggagaaactggtgcccctggtgta
actgttcaatctaatgttcccggcccagttggtgcccctggttaccctggtaaagacgga
gctcctggcgctcctggaggacccgggcccattggcccagttggaacaactggaccccaa
ggccccgctggtaaagatggttctcctggttaccctggcagccctggtcccaagggagag
gctggaactcgaggttacaacggtgctccaggcaaagacggacttaacggcgctcctgga
tctatcggccctgttggacctcaaggccctgttggaaatccaggctacgatggagctcct
ggtaaagacggttccaatggcttgactggcgctcctggaaaagatggatacaacggtgct
cctggtgctccaggacctcaaggcgaacaaggcaaaactggtaaggatggtaatcctggg
ggatctggtgcccctggtggccccggagctcccggctcccaaggtcttcaaggaaaagag
ggcccctctggataccctggcagccctggctccgttggacctgttggaccagttggaccg
atcggaccgatcggacctcaaggtaaacctggaactcctggataccccggcggtcctggt
cccgtcggccccgtcggtccggtcggccctgctggctaccaaggcaaaactgggcaaact
ggaccccctggaccagttggaccaattggaccgatcggtgctccaggacatgtcacctac
gccgctcctgggcgctatcattaa
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