Daphnia pulicaria: 124312804
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Entry
124312804 CDS
T08670
Name
(RefSeq) TATA-binding protein-associated factor 2N-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124312804
Spliceosome [BR:
dpz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124312804
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
IHABP4_N
Motif
Other DBs
NCBI-GeneID:
124312804
NCBI-ProteinID:
XP_046633232
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Position
1:16949423..16953342
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AA seq
542 aa
AA seq
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MEATYGIGITNRYALFLDEGEDPLEVIKEKTKKPAEKTVDAGAKTGSAKPAEVKGKAGGA
PTQPATAAKKTAVLKETQANVIKPAEQNKPREDGYRSGLGPRPPRGDRGGRFPNSIPREE
RNNRRNEDRPRDFGSVTNTEGGSPGTGNDAEFRPRSAFRGERGAFRGGDRGGRGRGRGRG
GMQDQRGKRDFDRQSGSDKSGVKPIEKREGSGPHNWGSVQDEIEGQLEPAVAEEVVEGEA
EVVAPAETAEVKEGEETAPVAPEDEEPKELTLDEWRALRGERKKPEFNIRKPGEGEDNSQ
WKKTFVLDKKKDDDESEEEIIDLTAEYPQRAGRQKRLDIEIRFSDSRRGSDRGGRGRGRG
RGEGGFRGDREGGYRGGFREGGEQREGGGYREGGYRGGYRGGDREGGEQREGGGYRGGFR
GDREGGEQREGGYRGGYRGGDREGGETREGGGYRGGFRGDREGGEQREGGYRGGYRGGYR
GDREGGEQREGGGGYRGGYRGDREGGERGTYRGGRGSRGGNRGPSMPAAPKVDDEKDFPA
LG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacgtacgggataggaatcaccaataggtatgcgttgtttttagatgagggt
gaagatcctctggaagtcattaaggagaaaaccaagaaaccggcagagaaaacagtcgat
gccggagctaaaactggtagtgcgaagccggccgaagtcaaaggcaaagccggtggagct
cctactcaaccagctacagcagctaagaaaactgctgtactaaaggagacgcaagccaat
gttatcaaacccgccgaacaaaacaagccccgtgaagatggatatcgatctggccttggt
cctagaccaccaaggggagacaggggaggtcgtttccccaacagcattccccgagaagaa
aggaacaacaggaggaatgaagaccgtcctagggattttggatccgtgactaacacggag
ggtggatctcctggcacgggtaacgatgctgaattccgtcctcgctcggcgttccgtggt
gaacgaggtgcgttccgcggcggagaccgtggcggccgtggtcgtggacgcggtcgtggc
ggtatgcaagaccaacgaggaaaacgcgattttgaccgccaatctggctctgacaagagt
ggcgttaaacccattgagaaacgtgaaggtagtggtccgcacaattggggaagcgtccaa
gacgaaatcgagggccagctggagcctgctgtcgctgaagaggttgtcgagggagaggct
gaagtcgtcgctcctgccgaaacagctgaagtcaaggagggagaagagactgctccagtg
gctcctgaagatgaagagcccaaggagttgacgctagatgagtggagagctctgaggggt
gaacgcaagaagcccgagttcaatattcgcaagccaggagaaggtgaagacaactctcaa
tggaaaaagacctttgttcttgacaagaagaaggatgacgatgaaagcgaagaggaaatt
atcgatctgacggccgagtatcctcaacgagctggacgccaaaagcgtttggacatcgag
atccgcttctctgactcgcgtcgtggaagcgatcgcggtggtcgtggtcgcggaaggggt
cgcggcgagggaggattccgtggtgatcgcgaaggcggttaccgtggaggcttccgcgaa
ggtggagagcaacgtgaaggtggtggatatcgcgagggaggctaccgtggtggataccgc
ggcggcgatcgcgaaggtggagaacaacgtgaaggcggcggataccgtggaggcttccgc
ggagatcgcgagggaggcgagcaacgcgaaggaggttaccgtggtggataccgcggtggc
gatcgcgagggaggcgagacccgtgagggtggcggataccgtggaggtttccgcggagat
cgcgagggaggcgagcaacgtgaaggcggctaccgtggaggttaccgcggtggataccgt
ggcgatcgcgaaggaggcgaacaacgtgaaggtggtggcggatatcgtggtggataccgc
ggcgatcgcgaaggaggcgaacgtggtacttaccgtggcggaagaggatcccgtggtggt
aatcgcggtccgtccatgccagccgctcctaaagtggacgatgagaaggatttcccggcc
ctcggctaa
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