Daphnia pulicaria: 124312869
Help
Entry
124312869 CDS
T08670
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00061
Fatty acid biosynthesis
dpz00071
Fatty acid degradation
dpz01100
Metabolic pathways
dpz01212
Fatty acid metabolism
Module
dpz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124312869
00071 Fatty acid degradation
124312869
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dpz01004
]
124312869
Enzymes [BR:
dpz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124312869
Lipid biosynthesis proteins [BR:
dpz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124312869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
REST_helical
Motif
Other DBs
NCBI-GeneID:
124312869
NCBI-ProteinID:
XP_046633356
LinkDB
All DBs
Position
9:2412968..2422558
Genome browser
AA seq
900 aa
AA seq
DB search
MSRHQQQQLSSMPSLTPSHDHHQLDAISSADLSLQQQPMSSVVEMTPRRKQAYGDVISEM
NNKTSFESRRIHHEDPEIHTIVPSGDSKRVVLISSKSRGSDWDLTMVKDEQDSNNGVESE
DSGFQLDADSSSIKIIAPAPVNDAAAAAAPADMTVTTQKSGTTVINITPPCKMEHRLLEH
LHSTPLPSIVSAEVARDCPDLGKRRTSSVLEAKDSSKSVGEMRQQPKELNKGPDQLFPAD
SYTTTSATGAVKLKIDERGMASIPPLSVPTLLQRTVARHMDHPALCVKRDGKWIKWTYKQ
YLHDVRVCAKAFIRLGLERFHSVCILGFNSPEWIIADLAAIHAGGFAAGIYTTNSAEACL
HCALNGQADIIVVEDRKQLEKILSIKDQIPTLKAIVQYTGKPHVEGVITWSQLMHLGNAT
PDNVYEDRLKKLAVNQCCTLIYTSGTTGPPKGVMLNHDNLTWISHNLATYMNLRDGKDTF
LSYLPLSHVAAQITDIYAPLSVGGTVYFADPDVLKGTLAETLREVRPTCFFGVPRVWEKI
YEKMQAIGKQTTGIKKTIATWSKSVGLSYNRRRMEGRSSKPFGFALANALVFKKVREGLG
LDKARVILSGAAPLSKEVAEYFTSLDIPILEVYGMSESTGPHSINNITKGYQLNSAGKSV
PGCLTKIANPDKDGNGEILMGGRHVFMGYLNDPGNTSSVVDADGYLSTGDVGHTDKFGFV
YITGRIKEILITAGGENVAPVLIEDNIKAELPIVSHAMVVGDRRKFLSILLTLRTEVDPD
TQEPLPILTRPTRDICESYGLSLAETVTDVICAAERGMAERDPMAALTGQDAEAVKFVKV
IDAAIERANRNAISAAQRVQKWTILPVDFSIPGGELGPTMKMKRSCVAKKYADVIERFYY
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcatcagcagcagcagttgagcagcatgccctccttgacgccgagtcacgat
catcatcaactagacgccatttcatcagccgacctttcattacagcagcagccaatgtct
tctgttgtcgagatgactccacgccgcaaacaggcttacggcgacgtcatcagtgaaatg
aacaacaagacgtcgtttgaatctcggcgaattcatcacgaggatcctgagatccacacg
atcgttccttctggcgactctaaacgggtcgtgttgatttcgtcgaaatctcgaggatct
gattgggacttgacgatggtgaaagacgagcaggacagcaacaatggagtggagagtgaa
gatagcggctttcaactggatgccgattcgtccagcatcaagataatcgcccccgctccc
gtcaatgatgccgccgccgccgccgcacccgccgacatgacggtcacgacccaaaagagt
gggacgaccgtgattaacatcacgccgccttgcaagatggagcacagattgctggaacat
ttgcacagcactccgttgccgtccatcgtcagtgccgaagtcgccagagattgcccagat
ttaggcaaaagacggacgagtagcgtgttggaagccaaggattccagcaaatctgtcgga
gagatgcgtcagcaacccaaggaattgaataaaggtcccgaccaacttttcccggccgat
tcgtacacgacgacttcagcgactggagctgtcaagctcaagattgatgaacgaggcatg
gcgtcgattccaccgctgtcggtgccgactttgctgcagcgcaccgtggccagacatatg
gatcatcctgccctttgcgtcaaacgtgatggaaagtggatcaagtggacgtacaagcag
tacttgcacgatgtgagggtgtgtgccaaggctttcatccgcttggggctggaacgtttc
cattcggtttgtattttgggttttaattcacccgaatggatcatcgccgatttggctgcc
attcacgctggtggtttcgccgctggcatttacactacgaattcggccgaggcgtgtctg
cattgcgccttgaacgggcaggccgacatcatcgtggtggaggaccgcaaacagctggag
aaaatcctttccatcaaggaccaaattccgactttgaaggcgatcgtccagtacaccgga
aaaccgcacgtcgaaggagtcatcacctggtcgcaattgatgcatttgggcaacgccacg
cctgacaacgtctacgaggatcgtttaaagaagttggccgtcaatcagtgttgtacacta
atctacacgtctggaacgacgggacctccgaaaggcgtcatgctgaaccacgacaacctg
acttggatttcccacaacctggccacttatatgaacttgcgagacggcaaggatacgttt
ctcagttacctgccgctaagtcatgtcgcagctcagattaccgacatctacgctccgcta
tctgtaggcgggacggtctactttgccgatcctgatgttttgaagggaacgctggctgag
acgttgcgtgaagtgaggccgacatgttttttcggcgtgcctcgagtctgggagaaaatc
tacgagaagatgcaagccatcggcaaacagacgactggcatcaaaaagacgattgctact
tggtcaaagagcgttggattatcttacaaccgacgccgaatggaagggaggtcttcgaaa
ccgtttggattcgccctggccaatgcgctagtcttcaaaaaagtgcgtgaaggattgggt
ttggataaggcccgagtgatcttgtcgggtgccgcgcctctctccaaagaagtggccgaa
tattttacgagtctggatattcccatcttggaggtctacggaatgagcgagtcgacggga
ccgcactccatcaacaacatcacgaaaggttaccagctcaacagcgctggaaaatcggta
ccgggctgcctcacgaaaattgctaacccggacaaggacggcaatggagagattctgatg
ggcggacggcatgtgtttatgggttacttgaatgaccctggcaacacttcgtctgttgtg
gacgctgacggctatctgagcacgggcgatgttggtcataccgacaagtttggcttcgtc
tacatcactggccgcattaaagaaattctcattacggctggaggcgaaaacgtggctccg
gttctcattgaagataacattaaagcggaattgcccatagtcagtcacgctatggttgtc
ggtgataggcgaaaattcctttccattctcttgactttgagaactgaagtggatccggat
acgcaagagccgttgcccattttgacccggccgacccgggatatctgtgaaagttatggc
ctttcgctggctgaaacggtgacggacgtcatctgtgcggcagagcgaggcatggctgaa
cgtgatcccatggccgctctgactgggcaagatgctgaagctgtcaagtttgtcaaagtc
attgatgctgccatcgaaagggccaaccgtaacgccatttcggctgcccagcgcgttcag
aaatggaccatcttgcctgtcgatttctccattccaggtggagaattagggcccactatg
aagatgaagaggagttgtgttgccaaaaaatacgctgacgtcatcgaacgtttttactac
taa
DBGET
integrated database retrieval system
