Daphnia pulicaria: 124312879
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Entry
124312879 CDS
T08670
Name
(RefSeq) probable ATP-dependent RNA helicase vasa-like isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124312879
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124312879
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124312879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
DEAD
Helicase_C
zf-CCHC_3
ResIII
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
124312879
NCBI-ProteinID:
XP_046633377
LinkDB
All DBs
Position
1:complement(16986032..16989889)
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AA seq
787 aa
AA seq
DB search
MGDDWDDVITAPAKSSAGGSWNDNNNKGGMKPPAGRGRGAPTTVSQMSTVRAASDDEWGA
AANPASSSNGLDAPGKSTGNSNGWGASTAPASSGGWDAPTQNSQFNNDVEDQPRGGGFGS
SAGGGGYKGAGGGGSRACYKCGEEGHMSRECPNPNSGGGGGDRTCNKCQQPGHMARDCPT
GGGGGGGDFTCRKCQQPGHMARDCPSGGGGGDGACHKCKETGHMARDCPTGGGGGPRTCN
KCGDAGHIARECPSGGGGDTKCFKCKEEGHMSKDCTVESKCNNCYKLGHSTKECPDEYNS
LTEDGKPREKYTPPDMTTDENELFKGISSGEHFHNFDKVALQVTGQNIPQYITSFEEAGL
RPLLLQNIKNSGYVKPTPVQKGSIAVILAKRDLIASAVTGSGKTAAYLVPVMNILLEQGI
AGGSHGMVQKPEVVILAPTRELAIQIHREAYKFAYNSVLKSVIIYGGTVSSNQRSNLQAG
CNILVATTGRLKDFLDRGVFDFSAVKFLILDEADRMLDMGFGPDIEKIAAHPTMPPKGIR
RTCMFSATFPEEVQALAANYMEDYIFVTTGTVGGTNPDVQQTFYECARNEKRTKLIEILR
ELGEAKTIVFVDSKKTADFVAVFLCNSDIQATSIHGDRLQSQRETALREFRTGIRNVLVA
TNVAARGLDIEGVKYVINYDLPGDIEEYVHRIGRTGRVGNVGQSISFFDVEKDGPNAGKL
VSLLSKSNADVPAFLQALVSGMGGMGLDYNAPSTQGGFASRDMRRFGDKPVGGGGAARPT
EAEESWD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgattgggacgatgtgatcactgctccagctaaaagtagtgctggaggttca
tggaatgataacaacaataaaggaggaatgaaaccacctgctggtagaggaagaggagca
cctacgacagttagccagatgagcactgttagggcagcctctgatgatgaatggggagct
gcagcgaatcctgcttctagctcgaatggattggatgctccaggaaagtccactggaaat
tctaatggttggggtgcttcaactgctcctgccagctctggtggctgggatgcacccact
caaaactctcaattcaataatgatgtggaagaccagccacgaggtggtggatttggaagc
tctgcaggtggaggtggatacaaaggtgctggaggaggaggcagtcgtgcttgctacaag
tgtggagaagaaggacatatgtctagagaatgccctaatccaaatagtggtggtggaggt
ggagatcgcacatgtaataagtgtcaacagcctggacacatggcaagggattgcccaaca
ggaggtggtggtggaggtggagattttacatgtcgtaagtgtcaacagcctggacacatg
gcaagggattgcccatcgggaggtggaggtggagatggtgcatgtcataagtgtaaagaa
actggacacatggcaagggattgcccaacgggaggtggcggtgggcctcgtacgtgtaac
aagtgtggagatgctggacacatcgcaagggaatgcccatcaggtggtggtggagatacc
aaatgcttcaagtgtaaagaggaaggacacatgtcaaaggattgcacagtggaaagcaag
tgcaacaattgctacaaacttggtcatagtacaaaagaatgcccggacgaatataattcc
ctaactgaggatggaaaaccacgcgagaaatatacaccgccagatatgactaccgatgaa
aatgaattgttcaaggggatttcatccggagaacacttccacaactttgataaagttgct
cttcaggtgaccggacaaaatataccacagtacattacgtctttcgaagaagctggcttg
cgtccattgttgctgcagaacataaagaattcaggatatgttaaacctacccccgttcag
aaggggtcaattgcagttatcttggctaaaagagatttgattgccagtgcggtcactgga
tctggaaaaacggctgcatacttggttccggtgatgaatattttgttagagcaaggaatt
gctggtggctctcacggcatggttcagaagcctgaagttgtgatccttgcacccactcgc
gagttggccattcaaattcatcgcgaagcctacaaatttgcatacaattctgtgttgaag
tctgtgataatctacggtggaactgtttctagtaatcaaagaagtaatcttcaagctggt
tgcaacattcttgtggcaacgaccggtcgacttaaggattttcttgaccgtggtgtgttc
gacttttccgctgtaaagtttttgattttggacgaagcggatcgtatgctcgacatggga
tttggacccgatattgaaaaaattgctgctcatccaaccatgcccccaaaaggaattcgt
cgcacttgcatgttttcagccacttttccagaggaagtccaagcattggctgccaattac
atggaggattacattttcgtgactacaggaactgtgggcggaactaatcccgacgtccag
caaacgttttacgaatgtgcgcgcaatgaaaagaggaccaaattgatagaaatccttcgt
gaattgggagaagctaagactattgtgtttgtcgacagcaagaaaacggcagatttcgtt
gctgtatttttgtgcaatagcgatatccaggctacgagtatccacggtgaccgtcttcag
agtcaacgcgaaacagcacttcgtgaattcaggactggtatacgtaatgttctggttgcc
actaatgtcgctgcacgtggattagatattgagggcgtcaagtacgttattaattacgac
cttcctggtgatattgaggaatatgtgcatcgcattggtcgaactggtcgtgtgggtaat
gttggacaatcgattagtttctttgatgtagagaaagatggtcctaacgcgggcaagcta
gtttcattgctttcaaagtccaatgctgatgtccctgcattcttgcaagcgttggtgtcc
ggaatgggtggaatgggtcttgattacaatgcaccttcgactcagggtggtttcgctagt
cgtgacatgcgtcggtttggtgataaacctgtaggaggtggcggagctgctcgtccaacc
gaagctgaggagagctgggactaa
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