Daphnia pulicaria: 124312964
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Entry
124312964 CDS
T08670
Name
(RefSeq) recQ-mediated genome instability protein 1-like
KO
K10990
RecQ-mediated genome instability protein 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124312964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124312964
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124312964
FA (Fanconi anemia) pathway
124312964
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Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
RMI1_N_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
124312964
NCBI-ProteinID:
XP_046633536
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All DBs
Position
9:3555932..3561749
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AA seq
603 aa
AA seq
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MSMDDTRKRVQDHLKNKCRVASMTVPREWIDGCVAFYRNSNSNTNLNALLEFVAQQWFLV
DFESIKLRSLPVNLSKSALVNLNENYVLQLMSVLNIGQSAYSQHTKITQGLDNNSEVSAD
KKIPSKWEPKVRRMLRLELTDGSQSIQAIEYKAINHLHLDLIPGTKILVKGPVECRRGVI
LLRPNNVELLGGEVSDLVQKNAPENVLARLIGKPENANPVYGSYTEQTAAINDVEQDGDD
EFSSAKCSSSKESRPANTHQRKGGGGGGGGNCGGPANLNHRHQGPSSVTARGNTTTTTTT
NVKREKKRSLDDCDQQHHPDDKASGSSTSYPPAKKMVQNVKKEEEDLFPDDDDDYIFHTA
AAVEEEEEEKEVDMFPDDDDDILFTDMSGPPPPAVPTEPTTATTTTTRTRTEQQGQRQVK
ISGTAAAAAAHTIERPFTYLSSHLRKRASNVKCQQESICVKGFVSTITGKLAATKSETGV
TQWQLSAVINDGSAGLKVDFSPQVLEELIGHSPAALKSMMAVVGDDNKRRGLEVLEEAKQ
KLIRLNCLLHIRWPAAPDDPDCASNVRSSRSREIGIPATSHKLPVVYRLEDIERRHLEML
QLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggatgatacccgaaagagggtgcaggatcatttgaaaaacaaatgtcgtgtc
gcgtcgatgacggtcccacgtgaatggatcgatggctgtgtggccttctacaggaattca
aactccaacaccaatctcaacgccctgctggaatttgtggcgcagcagtggttcctggtg
gactttgagtccatcaaactcaggtcgctgccagtcaacttgagcaagtcagccctggtc
aacttgaacgagaactatgttcttcagctgatgtctgtcctgaatatcggccagtctgcc
tactcccagcacaccaaaatcacccagggtctggacaacaacagtgaggtgtcagcggac
aagaaaatcccttccaaatgggagcccaaagttaggaggatgcttcgactggagctcacc
gatggcagtcagagcattcaagccatagagtacaaggccatcaatcacctgcacttggac
ttgattcccgggaccaagatcctcgtcaaggggccagtcgagtgccgacgaggagtgatt
ctcctccgccccaataacgtcgagctgctgggtggagaagtgagtgatttggtgcagaag
aacgctcccgagaacgtcctggcccgtctcattggaaagccagagaacgccaacccggtc
tacggcagctacacggagcagacggcggccatcaacgacgtcgaacaagatggagacgat
gaattctcatccgccaaatgcagcagcagcaaggagtcgagaccggcaaacacccaccag
cgcaaaggtggcggcggcggcggcggaggcaattgcggagggccagccaatctcaatcac
cgtcatcaaggtccgtcgagcgtcaccgccagaggaaacacaacaacaaccacaacaacc
aacgtgaagagagagaaaaaaagaagtttggacgattgcgaccagcagcatcacccagac
gacaaagcatccggcagctctacctcctatccgccggccaagaaaatggtgcagaacgtg
aagaaagaggaggaggatctgttcccggatgatgacgacgattacattttccacacagcg
gccgccgtcgaagaagaagaagaagaaaaggaagtggacatgttcccagacgacgatgat
gacatccttttcacggacatgagcggtcctcctcctcccgccgtccctacggagccaacc
accgcaacaacaacaacaacaaggacgaggacagaacaacaaggacaacgtcaagttaaa
atcagtgggactgctgctgctgctgctgcccacacaattgaaaggccgttcacatattta
tcgagtcacctccgcaagagggccagcaacgtcaagtgtcaacaggaatccatttgcgtc
aaggggttcgtgtcgaccatcacgggcaagttggcggcgacgaaatcggagacgggcgtc
acccagtggcaactatcggccgtcatcaacgatggatcggccggattgaaagtcgatttc
agtccacaagtcctggaggagctgattggacattcccctgcagcgctgaaatcaatgatg
gccgtcgtcggtgacgacaacaaacgccgaggactcgaagttttagaggaggccaagcag
aaattgatccgattgaattgcctactgcacatccgctggccagcagctcctgatgatccg
gattgtgctagcaacgtcaggagcagtaggagcagagaaatcggaattccggccacaagc
cataagttgcccgtcgtctaccgtttggaggacatcgagcgccgacatctcgaaatgtta
caacttttgtga
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