Daphnia pulicaria: 124312968
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Entry
124312968 CDS
T08670
Name
(RefSeq) recQ-mediated genome instability protein 1-like
KO
K10990
RecQ-mediated genome instability protein 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124312968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124312968
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124312968
FA (Fanconi anemia) pathway
124312968
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GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
RMI1_N_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
124312968
NCBI-ProteinID:
XP_046633542
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Position
9:3814014..3819924
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AA seq
598 aa
AA seq
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MSMDDTRKRVQDHLKNKCRVASMTVPREWIDGCVAFYRNSNSNTNLNALLEFVAQQWFLV
DFESIKLRSLPVNLSKSALVNLNENYVLQLMSVLNIGQSAYSQHTKITQGLDNNSEVSAD
KKIPSKWEPKVRRMLRLELTDGSQSIQAIEYKAINHLHLDLIPGTKILVKGPVECRRGVI
LLRPNNVELLGGEVSDLVQKNAPENVLARLIGKPENANPVYGSYTEQTAAINDVEQDGDD
EFSSAKCSSSKESRPANAHQRKGGSGGGGGNCGGPANLNHRHQGPSSVTARGNTTTTNVK
REKKRSLDDCDQQQHPDDKASGSSTSYPPAKKMVQNVKKEEEDLFPDDDDDYIFHTAAAV
EEEEEEKEVDMFPDDDDDILFTDMSGPPPPAVPTEPTTATTTRTRTEQQGQRQVKISGTA
AAAAAHTIERPFTYLSSHLRKRASNVKCQQESICVKGFVSTITGKLAATKSETGVTQWQL
SAVINDGSAGLKVDFSPQVLEELIGHSPAALKSMMAVVGDDNKRRGLEVLEEAKQKLIRL
NCLLHIRWPAAPDDPDCASNVRSSRSREIGIPATSHKLPVVYRLEDIERRHLEMLQLL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggatgatacccgaaagagggtgcaggatcatttgaaaaacaaatgtcgtgtc
gcgtcgatgacggtcccacgtgaatggatcgatggctgtgtggccttctacagaaattca
aactccaacaccaatctcaacgccctgctggaatttgtggcgcagcagtggttcctggtg
gactttgagtccatcaaactcaggtcgctgccagtcaacttgagcaagtcagccctggtc
aacttgaacgagaactatgttcttcagctgatgtctgtcctgaatatcggccagtctgcc
tactcccagcacaccaaaatcacccagggtctggacaacaacagcgaggtgtcagcggac
aagaaaattccttccaaatgggagcccaaagttaggaggatgcttcgattggagctcacc
gatggcagtcagagcattcaagccatagagtacaaggccatcaatcacctgcacttggac
ttgattcccgggaccaagatactcgtcaaggggccagtcgagtgccgacgaggagtgatt
ctcctccgccccaataacgtcgagctgctgggtggagaagtgagtgatttggtgcagaag
aacgctcccgagaacgtcctggcccgtctcattggcaagccagagaacgccaacccggtc
tacggcagctacacggagcagacggcggccatcaacgacgtcgaacaagatggagacgat
gaattctcatccgccaaatgcagcagcagcaaggagtcgagaccggcaaacgcccaccag
cgcaaaggtggcagcggcggcggcggaggcaattgcggagggccagccaatctcaatcac
cgtcatcaaggtccgtcgagcgtcaccgccagaggaaacacaaccacaaccaacgtgaag
agagagaaaaaaagaagtttggacgattgcgaccagcagcagcacccagacgacaaagca
tccggcagctctacctcctatccgccggccaagaaaatggtgcagaacgtgaagaaagag
gaggaggatctgttcccggatgatgacgacgattacattttccacacagcggccgccgtc
gaagaagaagaagaagaaaaggaagtggacatgttcccagacgacgatgatgacatcctt
ttcacggacatgagcggtcctcctcctcccgccgtccctacggagccaaccaccgcaaca
acaacaaggacgaggacagaacaacaaggacaacgtcaagttaaaatcagtgggactgct
gctgctgctgctgcccacacaattgaaaggccgttcacatatttatcgagtcacctccgc
aagagggccagcaacgtcaagtgtcaacaggaatccatttgcgtcaaggggtttgtgtcg
accatcacgggcaagttggcggcgacgaaatcggagacgggcgtcacccagtggcaacta
tcagccgtcatcaacgatggatcggccggattgaaagtcgatttcagtccacaagtcctg
gaggagctgattggacattcccctgcagcgctgaaatcaatgatggccgtcgtcggtgac
gacaacaaacgccgaggactcgaagttttagaggaggccaagcagaaattgatccgattg
aattgcctactgcacatccgttggccagcagctcctgatgatccggattgtgctagcaac
gtcaggagcagtaggagcagagaaatcggaattccggccacaagccataagttgcccgtc
gtctaccgtttggaggacatcgagcgccgacatctcgaaatgttacaacttttgtga
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