Daphnia pulicaria: 124313058
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Entry
124313058 CDS
T08670
Name
(RefSeq) uncharacterized protein LOC124313058
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
dpz
Daphnia pulicaria
Pathway
dpz03015
mRNA surveillance pathway
dpz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124313058
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124313058
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpz01009
]
124313058
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124313058
03036 Chromosome and associated proteins [BR:
dpz03036
]
124313058
Protein phosphatases and associated proteins [BR:
dpz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124313058
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124313058
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124313058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
DUF4187
Motif
Other DBs
NCBI-GeneID:
124313058
NCBI-ProteinID:
XP_046633720
LinkDB
All DBs
Position
1:complement(11864124..11881358)
Genome browser
AA seq
1224 aa
AA seq
DB search
MAVDPNELYDQLMRQNSAEQDIQAIAKQISDHAEAIYQTWKSKGLTPNELLHLHSAETAA
ETPGGDVPAAPSFRQMRTSVERRSHSTPHAERPKSGSSLSPVELLASPQLDATLEQLVNS
FVHEDKARLAARARTVSPSPVGIHVVQHQPTSAAASTIQSALKRFEMKGLNYESARSRQS
QPEPPVVSELGSAVRTSPSFQEAVQSTHLNRTSPGQSPVAEPSGTVKSRAQRFATRIELA
NASHVSPSWPVKRAVSPGPVQYHKVTVVAEVAAHSPVAAAAAATATTKSSSSTSEVDKEE
EKLINALKTGQVIDEIAVPTSPTPSDNFHQSMIKKTRERHQRNAPAAARVASSSGNAEEE
LESLVGRLKIIEPPVKSLPVSRESSPGPAIMLGVRDGSPSRSTSPRSVKLSETVPIAGVS
TVDYAKVRFQAAQAHPLTQQRLEDSRTIGKAQNSPQPNVVSETRSRFEGSTQSTRPAVNT
CAVPWRSGVQSNEWSPVRPPGPVNLGDELQSALQQSQSAAGSSGLSLEALRRMKTRKMRK
SPEPQPTGSGSNTGSPTSSPLPHPELTVQQKQHLRERNLQQQGSSGHHVGSVGLAVQYTS
TGIPIRPFLTRGSVAERVLIFEKCPTTITATDSSSKSEKVTSAASATTPEKSKRAGSPAP
QPWRHSNDVQTRVQGYTKDNNKENRSTSTTISSPRSTLRRQAKANNNLLLPRFYYPTGRP
ISKEQLDASLLRLAATFQQLPNCQASREHFGTIAKACGCPYYWKAILFIASGGEKLGHVT
LETFTDFWGKIINNYHDEASRFVQLLTMINLNVSVGRTDNNLNGSMNNSTGSGRFYLIPE
DFVPLVQDVVDTHPGLTFLKEAAEFHSRYVHTVIARIYYNVNRSWSGQITLTELRHSNLL
ATIRLLEDEEDINQITDYFSYEHFYVIYCKFWELDKDHDLFIDKKDLARHNDHALSSKMI
DRIFSGAVTRGAPHNNRLAKFGNTNTNMNNQPRMSYTEFVWFLISEEDKRHPTAIEYWFR
CMDLDGDGYLSMYELEYFYEEQLQRMESLGIETLPFEDCLCQMLDMIHPAVPGKVSLNDL
KRCQMTPIFFDTFFNLEKYLDHEQRDPFASQRDPDSENGDEILKISDWDRYAAEEYELLV
AEEGGPDHGDDMFMREEMTASEEDGGDHSSLPLSMERDVIMAESDVNDDHDDYSPLSVHS
SLGLGNAGHRSLFSVTPCSIEYQY
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatcccaacgaactctacgaccagctcatgcggcagaactctgccgagcag
gacatccaggccatcgccaaacaaatttccgatcacgccgaagccatttatcaaacgtgg
aaatccaaaggattgactcccaatgaactgctccatttgcattcggcggagacggcggca
gagactccgggcggcgacgtgccggctgccccatccttccggcaaatgagaacatcggtg
gagagacgcagccattcgactccgcatgcagagagacccaaatccggatcgtctctctct
cctgtcgaactgctggccagcccgcagctggatgctaccctcgaacaacttgtcaacagc
tttgtgcacgaagataaggcccggttagccgccagagcgcgcactgtatctccatcgccg
gtcggcatccatgttgtccagcatcaaccgacgtcggcggcggcttcgaccatccagtcg
gcccttaaacgttttgaaatgaagggcctgaattacgaatcggctcgcagccgacaaagc
cagccggaaccgccagttgtatccgagttgggcagcgcagtcagaacgtcgccttctttc
caggaagccgtacagtcgactcatttgaaccggacatcgcctgggcagtcgccagtggca
gagccatccgggacggtgaaaagccgagctcaaagattcgccacccgcatagaactggcg
aacgcgtctcacgtttcgcccagttggccggtcaagcgagccgtttcgcccggcccagtt
caatatcacaaggtaactgtcgtggccgaagtggcagctcactcgccagtagcagcagca
gcagcagctacggcgacgactaaatcgtcgtccagcacgagcgaagttgacaaagaagaa
gagaaattaatcaacgccctcaaaaccggtcaggttattgacgaaatcgcagttcctaca
tctcctacacccagcgataatttccaccagtcgatgatcaaaaagacgagagagcgacac
caacggaacgctccggctgctgcccgagtcgctagcagcagcggcaacgccgaggaagaa
ctggaatcgctggtgggccggttgaagattatcgaaccgccagtgaaatccttgccagtc
agtcgagagagcagcccgggtcccgccatcatgttgggcgttcgtgacggttcgccttca
cgttccacctctccgcggtcggtcaaactctctgaaactgtgcccattgccggcgtgtcg
accgtcgactacgccaaagtgcgcttccaggccgctcaggcccatccgctcacccagcaa
agactggaggattccaggacgatcggcaaagcccagaattcgcctcaaccgaatgtcgtc
tcggaaacccgcagccgtttcgaaggatcgactcaatcaacccgtccagccgtcaacact
tgcgccgtaccctggcgatccggcgtccagtccaacgaatggtcacccgttcgcccaccg
ggccctgtcaacctgggcgatgaattgcaatcggccctgcagcaatcgcagtcggccgcc
ggctcttccggcttgagtctggaagctcttcggcgcatgaagacgcgtaaaatgcgcaaa
tcgccggaaccgcagccaacgggatccggatctaatacgggcagtccaacttcctctccg
ctgcctcatccggaattgaccgtccagcagaagcagcacctccgcgaacgcaatctccag
cagcagggatccagtggtcatcacgttggatcggttggattggccgtccagtacacttcg
acgggcataccgatccggccgtttttgacccgaggttccgtcgccgaaagggtcctgatt
tttgaaaaatgtccgacgaccatcacggcgacggattcgtccagcaaatcggagaaggtg
acctctgccgccagcgctacgacccccgagaaatcgaaacgggccggcagcccagctccg
caaccttggcgacactccaatgatgtccaaactcgagtccagggctacaccaaggataac
aacaaggagaatcgatctacatcgacgactatttcatcacccagatcgactctacgccgc
caggctaaagccaacaacaatctccttttgcccagattttactacccaacgggacgaccc
atcagcaaagaacagctggacgcctccctgctaaggctggccgcaacgtttcaacagctg
cccaactgccaggccagtcgcgaacatttcggaaccatcgccaaggcttgtggttgtcct
tactactggaaagccattctgtttatcgccagcggcggcgaaaagcttggacatgttacg
ctggaaaccttcaccgacttctggggaaaaatcattaacaactatcatgacgaagcttcg
cgattcgttcaactcttgaccatgatcaacctgaatgtgagcgtcggcaggacggacaac
aatctaaacggctcgatgaataacagcaccggttcaggccggttctatctgataccggag
gatttcgtgccgctcgttcaagacgtggtcgacactcacccaggattgaccttcctgaaa
gaggcggctgaatttcattcgcgctacgttcacacggtgatcgccaggatttattacaat
gtcaaccgatcctggtcagggcagatcactctcaccgaattgcgtcattcgaatttgttg
gccacgattcgcttgctggaggacgaggaggacattaaccaaatcaccgactatttcagc
tacgagcacttttacgtcatctactgcaagttctgggagttggataaagatcacgatctc
tttatcgacaagaaagatctggcccgtcacaatgaccacgcgctgtcctccaagatgatc
gatcggatattctctggagcggtcacccgcggcgcccctcacaataatcgactggccaaa
tttggcaacaccaacaccaacatgaacaatcagccgcgtatgagttacaccgagtttgtc
tggttcctcatctccgaggaagacaagcgacaccccaccgccatcgaatactggttcagg
tgtatggatttggacggtgacggctacctttcgatgtacgagctcgagtacttttacgag
gaacagctgcagcggatggaatcgctgggcatcgaaacgttgccgtttgaagattgcctc
tgtcagatgctagacatgattcacccggccgtgcccggtaaagtctcgctgaacgacctc
aagcgctgccagatgacacccatctttttcgacactttcttcaacctggaaaagtacctg
gatcacgagcaacgcgacccgttcgcctcgcaacgcgaccccgattcagagaacggcgac
gaaatactcaaaatatccgactgggatcgctacgcagccgaagaatacgaattgctggtg
gccgaagaaggcgggccggatcacggcgatgacatgttcatgcgggaggaaatgaccgcc
agcgaggaggatggcggcgatcattcttctttgcccttatcgatggaacgtgacgtcatc
atggccgaatcggatgtgaacgacgaccatgacgactactcgccgctgtcggtccattcg
agcctgggactgggcaacgccggccatcgctccctcttctccgtcacaccttgctcgatc
gaataccaatattga
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integrated database retrieval system
