Daphnia pulicaria: 124313226
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Entry
124313226 CDS
T08670
Name
(RefSeq) syntaxin-18-like
KO
K08492
syntaxin 18
Organism
dpz
Daphnia pulicaria
Pathway
dpz04130
SNARE interactions in vesicular transport
dpz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124313226
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124313226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124313226
Membrane trafficking [BR:
dpz04131
]
SNARE
Syntaxin (Qa)
Stx-rER
124313226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6827
INTS5_N
COG4_N
mSLOG
Motif
Other DBs
NCBI-GeneID:
124313226
NCBI-ProteinID:
XP_046633992
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Position
9:complement(2426147..2464843)
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AA seq
316 aa
AA seq
DB search
MMDITSLFKASIKTVRTRNKALGLNNKPEDPNRIFPRPSKDLSKFQTKAKEIVSNVAKLK
EFLTENRKAYLDTSVQLFNQVPKLSQADRAEFDHTTQLIIKTSNQYLQELKRENASQTHA
NAQTKEHRTIVISIIEQYFKSVCKTYSELKELYSKRQHELNKVTKLEGDGMASFRKSSLG
YESPTDSPRVYSSYDDDDKKADEENVNFTVAEVQLFEKENSLLFNELNSLTEEVNQISGR
VVKIAELQQVLTEKVLDQEKDIERIATTTVSATENIREGNEQLRQALQSNSGFRIAIIFF
ILVLFFSILFLDWYND
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatcacgtccctgtttaaggcctccatcaagacggtccggacacgcaataaa
gctctgggattaaataacaaacccgaagacccaaatcgtatttttccacgaccatccaaa
gatctttccaaattccaaacgaaagccaaagagattgtctcaaatgtggccaagttgaag
gagttcttgacggagaatcgaaaggcatatctagatacaagtgttcaactattcaaccag
gtccccaagttaagtcaagctgatcgagcagagtttgaccataccacccaactcatcatc
aaaacaagtaaccaatatttgcaagaactaaaacgagaaaatgcatctcagactcatgcc
aacgcccagacaaaggaacaccgcaccattgtgatcagcattattgagcaatactttaaa
tctgtatgcaaaacttacagcgagctgaaggagttgtactccaagcgccagcatgagctc
aacaaagtcaccaaacttgaaggagatggaatggccagtttccgaaaatccagcctggga
tacgagagccccaccgacagtcccagggtctactccagttacgacgacgatgacaagaaa
gccgacgaggagaacgtgaactttaccgtagccgaagttcaactgtttgaaaaggagaat
tccctcttgtttaacgaattaaatagtctaacggaagaagtcaaccagatttcagggcgt
gtcgtcaagattgccgaactgcagcaagttttgacagaaaaagtcctggaccaggaaaaa
gatattgaacgaatcgccactaccaccgtctcggctactgaaaatattcgcgagggcaac
gaacaactacgacaagcactgcaaagcaactctggttttcgaatcgccatcatctttttt
attcttgttctattcttctccatacttttcctcgattggtacaatgattga
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