Daphnia pulicaria: 124313338
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Entry
124313338 CDS
T08670
Name
(RefSeq) uncharacterized protein LOC124313338
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124313338
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
124313338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
TRAF3_RING
zf-C3HC4_4
RING_XB3-XBAT31
zf-rbx1
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124313338
NCBI-ProteinID:
XP_046634179
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All DBs
Position
1:27746969..27748954
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AA seq
415 aa
AA seq
DB search
MATGGSNEDDYLSTCGICFIKYDLLMNRPKVLPCSHTYCFTCIQAMISSGNPLKCPMCRK
TAVGIVKVESLPNNVHAEHIVLLNEKLEKAEAEAKLSSKLLDAYFKSNKSECQVFVITDD
HEPKVMSFNASKDAVNHFHHTSVKIPDTEKPAKLRIISWERFMVNDIAGFPLLMTSLVNI
LKAQNPDVVFLYNVEPATLDRLKKSLPNFRFIYEFNDQMSVTLLNTSVSYDSHEAVQLPV
EDTGDYNFLIVEAHVGSLKLKLINAEIDMYASDMWRENFTKLILDELGKDSDATANIILG
MGGCCDEQNWHTYTRDVGLPHRTVDVWEACKKPIMCNLIWRYDNMTETDVLEYKNFNGKM
HYCDEHRFSRVYLRPAQTVFAQPKFYGEIEFLNITPASHSAILVDFDVSSTFCLS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctactggaggttcaaatgaagatgactatttatcaacttgtggcatatgcttcatc
aagtatgaccttctgatgaatcggcccaaagtactgccttgctctcacacatactgtttc
acctgcattcaagctatgattagttctgggaatccattgaaatgtcctatgtgtcgaaaa
acagcagttggaattgttaaagttgaatccctacccaacaatgttcatgccgaacacatt
gttcttttgaatgagaagctagagaaagctgaagctgaggccaaattatcttcaaagtta
ctggatgcatatttcaaatccaacaagtctgaatgccaagtgtttgtcataacagatgat
catgagccaaaggttatgtctttcaacgccagtaaggacgccgtcaaccattttcatcat
acttctgtgaagataccggatacagaaaaaccagctaaattgcgaattatttcttgggaa
cgtttcatggttaatgacattgctggatttcctctgttgatgacatcacttgttaatatc
ttgaaagcacaaaatcctgatgttgtgtttctctacaacgtcgagccggccactctcgat
cgccttaaaaagagtcttcccaatttcagatttatttatgaattcaacgatcagatgagc
gtaaccctgttgaacacttccgtgtcttatgattcccacgaagccgtacaacttcccgta
gaggacactggtgactataactttcttatagttgaagcacatgtgggatctctgaaacta
aaattaatcaacgctgagattgacatgtacgcaagtgacatgtggcgggagaattttacg
aaattgatattggacgaactaggaaaggattccgatgcaacagcgaacatcattttggga
atggggggttgctgtgatgaacaaaattggcatacctacacacgagacgttggactacct
catcgcaccgttgatgtatgggaagcgtgcaaaaaaccaataatgtgtaacctcatctgg
cgctatgacaacatgactgaaaccgatgtcttagaatataaaaattttaacggtaaaatg
cactattgcgacgaacatcgtttttcacgcgtatacttacgtccggcccaaactgttttc
gcccaacctaaattctatggtgaaattgagttcttaaacatcaccccagcctctcactca
gcgatcttagttgatttcgatgtttcaagcacattttgtctatcgtga
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