Daphnia pulicaria: 124313731
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Entry
124313731 CDS
T08670
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124313731
03036 Chromosome and associated proteins [BR:
dpz03036
]
124313731
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124313731
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124313731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_7
YqgF
HTH_44
HHH_3
Tex_central_region
Spt6_S1
S1
Tex_N
Ribosomal_L32e
HHH_9
S1_RRP5
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
124313731
NCBI-ProteinID:
XP_046634499
LinkDB
All DBs
Position
9:complement(695246..699403)
Genome browser
AA seq
1221 aa
AA seq
DB search
MSEEYFGADSSSIETSSGSKRKRDDEEELDDQLSEENLGCKIKDKKTTLVRVKRIDDDES
DDSQNQDEEKYEGEQKIQKTDMPERMQLRNIPITSVGSDELESEVEWIFKHGFSKASISN
QDGTADGREDVIKGKIRNALEFIRNQHFEVPFIAFYRKEYVLPELSVNDLWKVHKFDEKW
TKLQTRKNNMMRLFKKMQKYQSEKLTQNLTKSIPKNVRVLKDEDIDTLRMVQSSEELSDV
YNHFTLYYGNDVPAMREEYRRRKREEAKERRSSAARRRLNDLGEDLRDPDDVNADLYSRG
ASAGLDGLLRKYGLSRIEQFADNYQRHDIHQSQTTKDPCDVALEYAFSKFPNAAEFLKAA
NYMLAVQIAKEPSVRKFVRESFFERARFDVIPTKEGLKKIDEMHDLYSLKFLKNKPVRDL
VNDQFLRLWVAEQDKLLTIVFQTKIDGATTASYLDDMKSLLTRDESSKLVQEWDDLRKEI
IDLALSKFVLPSLVKELKEKLLNEAQDFVKRACCQQLYNWLNVAPYEVNFRDNEGWDTEN
GITVLGLSYGEDKKETVYGCLIKGDGELSNQIRLEHILNGTTAEKEKTLKTMKNFISSFK
PHGIAVSAESKEAIMLVEKLRAIISELVKEKKCPMINVVLVDNSLAKVCAKSTRADFPQD
WLFGEAITIARVLQVNFQTSIFFFIQDPLIAYSQLCNADKDILNLKYHPLQYQLSKEELF
EGLYLEFVNRTNEVGVDINRAIKHPRTAHLIQFICGLGPRKADDLMKTLKNQRLENRSQL
ETACHMGPKVFTNCAGFIKIDTHLSGDGAESQVEVLDGSRVHPEIYHWARNFAVAALKYH
GGKDVDPDGAVKKILEAPKKLEGLDLDALAAYIEHQGYGNTRITLESIRSELLHLYKDGR
PSYQAPSHEEDIFNMITKETPQTFYKGKMVLATVTGFQRRKPKREELDKANPKKNETTGL
WQCPFCLQNDFTDLSEVWNHFDAGSCSGQAIGVSICLENGLSGFLPMKCLSDSNVTNPEE
RVRLGQTIHCRITKINFEDFSVDVTSRSSDLNDINGVWRPPKDPFYDGPAEKAMLKAEED
AKKLRQRNTESVVVHPASNTSNTTERRSGGPSSRSRSRSPNRGRTARTIGSSSRSRSPLH
QSSPLRRPSPRPPALPPVGAPAPSLIVAPPWFHNMQCPHFRDHSQCPRGNLCPYVTGPYQ
PDLQLMEALDMPGRDPPQNPQ
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaatattttggagcagatagtagcagcattgaaacctctagtggtagtaaa
cgaaaaagagatgatgaagaggaattggatgaccaacttagtgaagaaaacttgggctgc
aaaatcaaggataagaaaacaactttagtcagagtcaaaaggattgacgatgatgagtct
gatgatagccaaaatcaagatgaagaaaagtatgagggtgaacaaaagattcaaaaaacg
gatatgccggaacgcatgcaactacgtaacattcccattacgtctgttggttctgatgaa
ttggagtcagaagtcgagtggattttcaagcatggtttttccaaagcgtcaatatccaat
caggacggtacggcagatggacgggaagatgtgataaagggaaagattcgtaatgctctc
gaattcattcgcaatcaacacttcgaagtcccttttatagccttctatcgtaaagaatac
gtcctaccagaattgagcgtgaatgacctttggaaagtccacaagtttgatgaaaagtgg
accaaactgcagacacgtaaaaacaacatgatgcgactcttcaagaagatgcaaaaatat
caatcggagaagctcacgcagaatttgacgaaatctattcctaagaacgtgcgtgttctt
aaagatgaagacatcgacacattgagaatggtccaatccagtgaagagttgagcgacgtt
tacaatcacttcaccctttactacggcaatgatgtacctgccatgcgagaagaataccgt
cgaaggaaaagagaagaagccaaagaacggcgaagctcagcagccaggcgaagattgaat
gacttgggtgaagacttgcgcgacccagatgatgtgaatgctgacttatactctcgtggc
gccagtgctggtcttgatgggttgctaaggaaatacggtttatctcgcatcgagcagttc
gccgacaattaccaacgacacgacattcatcaaagtcaaacaacaaaagatccttgcgat
gttgccctcgaatatgccttctccaagtttccaaacgctgctgaatttctcaaagcggca
aactacatgttggctgtacaaatcgctaaagaaccttcggttcgtaagtttgtccgtgaa
tctttttttgaacgcgctcgttttgatgtcatccctacgaaggaaggcttgaagaaaatc
gacgagatgcacgacctttattctctcaaattccttaaaaacaagccagtgcgggattta
gtcaatgatcaattcctccgactgtgggtcgctgagcaagacaagttgctaaccattgtc
ttccaaacgaaaattgatggagccactaccgccagttaccttgacgacatgaagtcactc
cttacccgcgacgaatccagcaaactcgtacaggaatgggatgatctgcgtaaagaaatc
atcgatcttgccctcagtaaatttgtattaccgtcactggtcaaagaactcaaggaaaag
ctgttgaacgaagcacaagactttgtaaagagagcttgctgccaacaattatacaactgg
ctcaacgtggccccttacgaagtcaactttcgtgacaatgaaggttgggacactgaaaat
ggaatcacagtcctgggtctcagctatggagaagataaaaaagaaacagtttatggttgt
ttgatcaaaggcgatggtgaattatccaatcaaattcgtctggaacacattctgaacggc
acaactgctgagaaggagaagaccctaaagacgatgaagaattttatctccagtttcaag
cctcatgggatcgccgtgagtgccgagtcaaaggaagccataatgctggttgaaaaattg
cgagcaataatatctgagcttgtcaaggaaaagaagtgcccaatgatcaatgtcgtacta
gtcgacaacagtttggccaaagtgtgtgcaaagtcgactcgggccgatttccctcaagat
tggctgtttggcgaagcaatcaccatagcaagagttctccaggtaaattttcaaacttca
atatttttttttattcaggacccgcttattgcatactcgcaactgtgtaatgccgacaaa
gacatcctcaatctcaaatatcatccgttgcaatatcaactatccaaagaagaactcttc
gaaggtctctatcttgaatttgtgaaccgaacgaacgaagttggtgttgacatcaatcgc
gccatcaaacacccacgcacggcgcatttgattcaattcatatgcggtctcggaccccga
aaagctgacgatttgatgaaaaccctgaagaaccagcgattagagaatcgatctcagttg
gagactgcttgtcacatgggtccaaaggtgttcactaactgcgctggcttcataaaaatc
gacacacatttgtcgggtgacggtgccgagtcgcaggtcgaagtgctagatggttctcgt
gtccatccggaaatctaccattgggctcgtaatttcgctgtagctgctctcaagtaccat
ggtggaaaagatgtcgaccctgatggtgcagtgaaaaagattctggaagcccccaaaaag
ctcgaaggtttggatttggatgcccttgctgcttatattgagcatcaaggttacggcaac
acacgaattactttggagagcattcgctctgaactactccatctctacaaggatggtcgg
ccgtcatatcaagcgccctcacatgaagaagatatcttcaacatgattaccaaagaaact
ccgcaaaccttttataagggcaaaatggtcttggcaaccgtcaccggcttccaacgtcgt
aaacccaagcgagaagaactggacaaagccaatccaaagaaaaacgaaaccaccggcttg
tggcaatgcccattttgtctgcagaatgatttcactgatctgtcagaagtttggaatcat
tttgatgctggatcttgcagtggtcaggcgattggtgtgagcatctgcttggagaatgga
ctgtctggatttcttcctatgaagtgcctctctgattctaacgtcactaatccggaagaa
cgtgtccgtctaggacagacgatccattgtcgcataaccaagatcaatttcgaagacttt
tccgttgatgtcacttcaagatcttccgatttgaatgacataaatggtgtatggcgacca
ccaaaggatcctttctacgatggaccagctgaaaaggccatgttaaaggcagaagaggat
gccaaaaagcttcgtcaaaggaacacagaaagtgtcgttgttcatccggcttcaaacaca
tcgaatacgaccgaaaggaggtcagggggtccctcgtcccgttccaggtcacgcagtccg
aatcggggccggactgcccgtacgatcggatcgagcagcagaagtcgatcaccgttgcat
caatcatcacctttgagacgtccgtcacctcgtccccctgctttgccgccggtcggagcc
cctgccccatcattgatcgtcgctccgccctggttccacaatatgcaatgcccacatttc
agagatcatagtcaatgcccgaggggcaatctctgcccgtatgtcaccggtccataccag
ccggatctgcagttaatggaagcattggacatgcctggaagagatccaccacaaaatcct
cagtag
DBGET
integrated database retrieval system
