Daphnia pulicaria: 124313929
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Entry
124313929 CDS
T08670
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
dpz
Daphnia pulicaria
Pathway
dpz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124313929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124313929
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124313929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
HipA_2
Motif
Other DBs
NCBI-GeneID:
124313929
NCBI-ProteinID:
XP_046634739
LinkDB
All DBs
Position
10:complement(927666..931747)
Genome browser
AA seq
1206 aa
AA seq
DB search
MGKMALKRRKVNESGGPQTKKKPTFKKAKKVVEKVIDDSPEENFEDEDDNGFGDSEDGFD
DMEEIPLDITEAVSIVKKPAKPTSKPQTKAPAKIKTENVNQKDVSKAHKKDLQKPPTSQE
MNALRETENLFHSNIFKLQVEEMLTEISMKNKRKKEIEDWMNQLQDTIDNIPESGTHSIS
DTTWLDELNVTCPFESDCYDSTKTFQYLKPQKLIPIGSWAIGMTGKGISVDILIEIPRES
LERDDYLNYTYHRKRALYLAYLAAHLQKATALVQDAQFESFSGDLSRPILLVQPTGKLNQ
RVAFRIYASASADLVAVEKLLPRRNCVTSSSSKNFYNKPSPLYNMSVLADMRMAKINQHA
SEVLSSKKNILDSCLLLRIWLRHRQLDESIGMFVLTQFVVYLVDTKKLFPNMSIYQIIRT
VWLQLSRSDWSKEGITLRQQSDTAPLPVADAHASFPIVFLDETSTLNFCAHLSQAAYEWL
RWESTLAVGLLNKKGVNSFAALFITPKPFLLTFDNVVMIDDAQARLQKDKRQLYWLTGAA
EKIHQCLAKGLGDRLKLAACRRLPVGSWSVAIEPPKNTSRKLAFGFCFNSPAAWEVVNKG
PAADSPESVEFRSFWGEMSQLRRFQDGFICEAVHWPASNWAERRLICRRIVSFLLEKRLN
LSNSFVYIADQLETALFVPRLEKSVAYGTGEEFTMKALEALDELTKNLRSLEDLPLSIAQ
VQGVAATFRHAETFPPQPGIPQGRLSLFDKIGDNMLPSVEATPIYLPSLSVLLTLQTSGK
WPDDLEAVRRIKAAFYIQLAEKLRVLFDLVVRVFTDHIIVERRGYIFKLVIAYHRDVALL
KRFVEPNGIVKYRDNPESLLLQRDQEITPRLAAALRALHAEQPAYSTAVRLAKRWIASHM
LLEYLEEEAVEMIVASLFVDSTMYGLPSEEESGAKSSLHDAIDWVGPLTPQVAFFRFLQL
VSTYDWTSQPLVINFNNDLTPEVIRDIETSVAAQRAQLKSPLVLVTPYDPSGVAFTRSTP
PLPVWSRLMVLAQESLKLLERQLMESDVKTVDVFQAFRPPLDAYNCVIHLCKGAVARRLY
TLDSVLDKKVKLHEHQPRKTLSIYDYEPVDRLLDELRLAYADKARFFYDKYGGLLIGVMW
IDKAWSTPTEFKVSHVNGSMLVASSAAGGEKRLAPNLEAICQDFLIMGKGLVESVECGAL
VWQDSV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaatggcactaaagagacgcaaagtcaacgaatctggaggtcctcaaaccaaa
aagaagccgacatttaagaaagcaaaaaaagtcgtagagaaagtgatagacgattctcca
gaagaaaattttgaagatgaagatgacaatggttttggtgatagtgaagatggttttgat
gacatggaggaaattcctttagatattaccgaggctgtttcaattgttaaaaagccagct
aagcctacatctaaaccacagactaaagctcctgctaaaattaaaacagaaaacgttaac
cagaaggatgtttctaaagctcataaaaaggatttgcagaagcctccaacttctcaagaa
atgaatgctctgcgggaaactgaaaatcttttccactccaacatattcaaacttcaggtt
gaggaaatgttaacagaaatttcaatgaaaaataaacgcaagaaagaaatcgaagattgg
atgaatcaacttcaagacaccattgacaacatacctgaaagtggtacacattcaatctct
gacacaacttggctcgacgaactaaatgtcacgtgcccttttgaatctgattgttatgac
tcgactaagacattccagtatttgaaaccacaaaagctcatccctattggctcttgggct
attggcatgactggcaaaggcatatcagttgatatcctgattgagattcctcgagagtcg
ttagaacgggacgattatctgaattacacctaccatcgaaaaagagccttgtatctggcg
tacttggctgcccatttacagaaagcgacagcattggttcaagatgctcagttcgagtct
ttttccggagatctttcaagacccattcttctcgttcaacctacaggaaaactgaaccag
cgtgtagccttccgcatttacgcttctgcttctgcggatttggtagcagtagaaaaactt
cttcccagacggaattgtgttacaagctctagttcaaaaaatttttacaacaagccaagt
cctctgtacaacatgagcgtgttagccgacatgcggatggccaagatcaatcagcacgca
tcggaagtactctcatcaaagaagaatattctggactcgtgcctactcttacgaatctgg
cttcgacaccgacaacttgatgagtctatcggcatgttcgtcttgacccaatttgttgtc
tatttggttgacacaaagaagctcttcccgaacatgagcatatatcaaattattcgtact
gtttggcttcagttatctcgttcagattggtctaaagaaggaattactctacgtcaacag
tctgatacggctccgttgccggtcgccgatgcccacgcttcgttcccgattgtttttctg
gatgagacgagtacgttgaacttctgcgcccacctctcccaggcagcctacgaatggcta
agatgggaatccaccctggctgttgggttgctcaacaagaagggagtcaacagtttcgcc
gccctgttcatcactccgaagccgtttttgttgactttcgataacgttgtcatgattgac
gatgcgcaagccagattgcaaaaagacaaacgccaactctattggctgactggagcagct
gagaaaattcatcagtgtctcgccaaaggattgggcgaccgtctgaaattggcggcatgc
aggaggctgccagttgggtcatggtccgttgcaatcgaaccaccgaaaaacacttcacgg
aagttggctttcggattctgtttcaattctcccgctgcatgggaagtggtgaacaaagga
ccggccgccgacagcccagagtctgtcgaatttcgctctttctggggcgaaatgtctcaa
cttagacggtttcaagatggcttcatctgcgaagcagtacattggccagccagtaattgg
gctgaacgccgtctcatctgccgtcgaatcgtctcatttttgttggagaaacggctcaac
ttgtccaatagcttcgtttacatcgccgatcaattggagactgccctgtttgttcccagg
ttggagaaatcggtcgcttacggaacgggagaagagttcactatgaaggcccttgaagcc
ctggatgaactaacgaagaatctgcgatcactggaggacttgcctctctcgatagctcaa
gtgcaaggagtggctgcaactttcaggcacgccgaaacctttccaccccaaccagggatt
ccgcaaggtcgattatctcttttcgacaaaattggagataacatgctcccttctgtcgaa
gcgactcctatttaccttccctcgctatcggtcctgttgactttgcaaacgagcggcaag
tggcccgatgatctcgaagccgttcgccggatcaaagcggctttctacatccagctggcc
gaaaaacttcgcgtcctctttgacctcgtcgttcgagttttcaccgatcacatcattgtg
gagcgcagaggctacattttcaagttggtgatcgcttatcatcgagatgtagccttgttg
aaacgcttcgtcgagcctaacggaattgtcaagtaccgcgacaatccggaatcactcctc
ctgcaaagggatcaagagattaccccgagactggcagcggcactacgtgccctacatgcg
gagcagccagcctacagcacggccgttcgtttggccaagcgttggatcgcttcgcacatg
ctgttggaatatctcgaagaagaagccgttgaaatgattgtggccagcctgtttgttgat
tcgaccatgtacggattaccgtcggaagaagaatccggcgccaagtcctcgctgcatgac
gccatcgactgggtgggacctttgacacctcaagtggctttcttccggttcctccagtta
gtttcgacctacgactggactagccagccgctcgtcatcaatttcaacaatgacctcaca
ccagaagtgattcgcgacattgaaacatctgtcgcagcccagcgagcccagctgaaatca
cctttagtcctggtgacaccttacgatccatccggcgtggcgttcacgcgtagcacgcca
ccgctgcccgtctggtcacgtctgatggtgttagcccaagagtcgctcaaattgctggag
cgtcagttgatggaatccgacgtgaaaaccgtggacgtgttccaggcattccgtccaccc
ttggatgcctacaactgtgtgatccatctgtgtaaaggcgctgtcgcccgccgtctgtac
acgctcgatagtgtgctcgacaagaaggtgaagcttcacgagcaccagcctaggaagacg
ctctccatctacgattacgagcccgtcgatcgactgctggatgagttacgattggcctat
gccgacaaggcccgctttttctatgacaagtatggaggcttgctgatcggcgtcatgtgg
atcgacaaagcctggagcacgccaactgaatttaaagtctcccacgtgaacggctccatg
ttggtggcgtcttcggccgcaggtggtgaaaagcggttagcccccaatttggaagccatc
tgccaggattttctcattatgggcaaaggtctggtcgagtcggtcgaatgcggagcactt
gtttggcaagattcagtctga
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