Daphnia pulicaria: 124314122
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Entry
124314122 CDS
T08670
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124314122
04121 Ubiquitin system [BR:
dpz04121
]
124314122
Enzymes [BR:
dpz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124314122
Membrane trafficking [BR:
dpz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124314122
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124314122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-Nse
zf-ANAPC11
zf-RING_6
zf-C3HC4_3
DZR
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
124314122
NCBI-ProteinID:
XP_046635129
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All DBs
Position
10:2556026..2558855
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AA seq
431 aa
AA seq
DB search
MAAVSEPNSSNRFFCHRCNVEIARVLPGFKCPRCNSGFIEEMELPTQQSFSDESSDEGDA
EMVTSIGELLSQSLFGSLRDATVPQAANNGEREDEEPSSTSSGAGNGTATRRRRQPVTFN
LPVRSTRRRTNSDRQMAPLETIIQEFIINLSGFDFDPAVLQAQGSPMFMYGNPGDYAFGR
AGLDAIITQLLNQMDGTGPPPMAKDKISQIPTVAIDQQQVEQNLQCSVCWEDFKLAEPVR
KLVCEHYYHTQCIVPWLQLHGTCPICRKALNDDSVDAESESASAAGPSTSSSSSSSANSS
SGISWLNSTRDGQTGGPRSVISSLIGSITNALSGGSSSSTSSASPSYQSSSPSFASSSQQ
QPGRENSSNPFSSFAPSHSYNLRSSRERPGGQESTEEDEDSSNGASAQQRPTQRFAGRGR
GRSHHFEDDYD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtttcggagccaaactcgtcgaatcggttcttttgtcaccgatgtaatgtg
gaaatcgctcgcgtccttcccggtttcaaatgtccaagatgtaacagtggctttattgag
gaaatggaactcccaacacagcaatctttcagcgatgaatctagtgatgaaggtgatgct
gaaatggtcacatctataggagaactcctcagccaaagtctatttggtagtttacgtgat
gcaacagtaccacaagcagcaaataatggcgaaagagaagatgaagaaccttcatccaca
tcttcaggcgctggaaatggaacagcgactcgacgaagacgacagcctgtaacttttaat
cttcccgttcggtcaactcgacggaggactaatagtgatcgccaaatggctcctttggaa
actattattcaagaattcattataaatctatcaggattcgattttgatccggcggtgttg
caggctcaaggctcacccatgttcatgtatggcaatccaggtgattatgcctttggccgg
gcaggcctagatgctatcataactcagttgctgaaccaaatggatggcacaggtccgcct
ccaatggctaaagataagatttctcagatccctactgtagcgatcgatcagcaacaagtc
gaacaaaatttgcagtgttcagtttgttgggaagacttcaaacttgctgaaccagtccga
aaattagtgtgtgagcactattaccacacacagtgtatcgtgccatggcttcagttacac
gggacctgcccgatttgtaggaaggctctcaacgatgattcggttgatgcggagagtgaa
agtgcttctgccgcagggccaagtacgtcatccagcagtagtagtagcgccaacagttca
agcggaatttcgtggctcaatagtaccagagatggccaaacaggaggtccgagatctgta
atttcttccttgattgggtcgatcaccaatgcgcttagtgggggatcgtcttcttcgaca
agttcagcgtctccatcataccaatcatcctctccttcgtttgcctcctcgtctcaacag
cagccagggcgcgagaattcaagtaatcctttcagctcttttgctccatcgcattcttac
aacttgcgcagcagcagagaacgacctggaggtcaagaaagcaccgaagaagatgaagat
tccagcaacggtgcaagtgctcagcagagacctacacagcgtttcgctggcagaggccgt
ggacgatcccatcactttgaagatgattatgactaa
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