Daphnia pulicaria: 124314501
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Entry
124314501 CDS
T08670
Name
(RefSeq) piwi-like protein Siwi isoform X1
KO
K02156
aubergine
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124314501
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124314501
piRNA pathway
124314501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoN
ArgoL1
Motif
Other DBs
NCBI-GeneID:
124314501
NCBI-ProteinID:
XP_046635668
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Position
1:26638790..26643994
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AA seq
873 aa
AA seq
DB search
MSDAERRGVKRSSRELQQHLPRRPQEKDRAHNGTSSQIIQEIRQGEVRGGEASGESGENA
GSSRGLSRIRNNQPLGNTTEKFFHQILSHDLVTRPTDARFSKAGSEGSQIDVQSNYFHLT
KRPDMKLLQYRVDFTPEIDHPGVKKALIRVHEQMIGKYIFDGTLLYNTTRLPQPLELISK
RKSDDSEVRITLRLTSEIQKEDPVYTSVTNLILRRCMSMLNLVMIRRNFYDKEAREDVPN
HPITIWPGYLTTIRHHEQEYFMNVEVINKFLRRDTAYDVMDKMRLANTDNLQERIKAELL
GKIVMTGYNNKTYRIDDVDFVNRADSTFHLKKEDRDISYIEYYKNRYQQNIRFPNQPMLV
SRPSRRDINGCANQNIEPQAIYLVPELCGMTGLSAEQRDNNNLKKAISTITRVTPDRRVE
TLLKFRRRLTNSPEIQRELTSWGLQFANDLVTCKARILPAKPLMTGAGRINIREGEWSSD
MQRNKMAVSAEFKEWIVILPSRMNQQVRHFVKSIQQVGLPQGFNVPEPRYVALEREQTSE
YINAMRDNVSQRDYDIVMCVLRTNRTDTYSAIKKYTFCERGIPSQVITGRIIEGNQGKLM
SVATKVMTQIACKLGAEPWKAQVPNKPWMIVGYDTFHDAAQRKAVGAFVASTNDSFTRYN
SSVKIHSANEEISPSFQDHMLTSLKAYYMAQVENKSKILLPENIIVYRDGIGAGDIQTVL
DIELGGIKEACKKAAMITKTGHYDPGISFVIVSKKINTRFFLKRRDAFGNPPCGTVVDNT
VTLSERFDFFLVSQKVNQGTISPINFNVIYNSSNITPDIHQSLAYALTHVYFNWPGTVRV
PAPIQYAHKLAYLIGERTQRMPLDNLAKYPYYL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcagaaaggcgtggtgtcaagagaagttcccgcgaactgcaacaacattta
ccaagacgcccgcaagaaaaggatagagctcacaacgggacctcatcacagatcattcag
gagatacgacaaggggaagtccgtggaggagaggcctcaggtgaaagtggagaaaatgct
ggatccagccgtggactcagccgtataagaaacaaccagcctttgggcaatacaaccgaa
aagtttttccatcaaattcttagccatgatcttgttactcgccccactgacgccagattc
agtaaagccgggtctgaaggatcgcagatcgacgtacaatccaactacttccatttgaca
aaaaggccggacatgaagttgttgcaatatcgagttgattttacaccggaaatcgatcac
cctggtgtaaaaaaagctctcattcgagtccacgagcaaatgattggaaaatacattttt
gacgggactcttctctacaataccactcgtctcccacaaccgctggaattgatttcgaaa
cgaaaatcggacgacagtgaagtcagaattactttaagactcaccagcgaaatacaaaaa
gaagatcctgtttacacttccgtaacgaatttaattttgcgacgctgcatgtcgatgctc
aacttggtgatgatacgacgcaatttttacgacaaagaagccagggaagacgttccgaat
cacccgataacaatttggcctggatacttgacaacgattcggcatcacgaacaagaatat
ttcatgaacgtggaagtcatcaataaatttcttcgcagagacactgcttacgacgtgatg
gacaaaatgcgtcttgccaacacagataacctacaagaacgaattaaagccgagctgttg
ggcaaaatcgtgatgacgggctacaacaacaaaacgtacaggatcgacgacgtcgatttt
gtcaacagagccgattcgacattccatttgaagaaagaagatagagacattagttacata
gaatattacaagaatcgttaccagcaaaacattcgatttccgaatcagccgatgctcgtg
tcaagaccatcacgtcgtgatatcaacggctgtgccaatcaaaacatcgaaccccaggcc
atctatctcgtcccagagttgtgcgggatgacgggtctttcagccgagcaaagggataat
aataatttgaagaaggctatttctacaattactcgcgtcacacctgataggagggtagaa
actttactgaaattccgtcgccggttaaccaacagtccggaaattcaacgagagctgacg
agctggggtcttcagtttgcaaacgatctcgtaacttgcaaggccagaattttaccagcc
aaacctctaatgacaggtgctggccggatcaacattagggaaggcgaatggagcagcgat
atgcaaagaaacaagatggccgtctcggctgaatttaaggaatggatcgtcatacttcca
agcagaatgaaccaacaagtaagacattttgtcaagtcgattcaacaagtcggccttcct
caaggatttaacgtgccggaacctcgctatgttgctctggaaagggaacaaacaagcgag
tacatcaatgctatgcgggacaatgtctcccagagagactacgatattgttatgtgcgtg
ttgcggactaatcgaacggacacgtattcggccatcaagaaatacaccttttgcgaaagg
ggtatcccctcacaggtaattacaggtcgaattattgaaggaaaccaggggaaattaatg
tcggtagctacaaaagtgatgactcaaattgcctgcaagttgggagctgaaccttggaaa
gcgcaagtgccaaacaagccatggatgattgtcggttatgacacgtttcacgacgccgca
caaagaaaagccgttggggcgttcgtggcttcaaccaacgacagtttcacgcgttacaat
tcgtccgtcaaaatccactcggccaacgaagagatttcaccgagtttccaagatcacatg
ctcacctcgttaaaagcttactacatggcccaagtggaaaacaaaagcaaaatactttta
ccagaaaatataatcgtctatcgtgacggcattggagccggggatatccaaactgtcctc
gatatcgaactcggtggcatcaaggaagcttgtaaaaaagcggcaatgattacgaaaacg
ggccattacgatcccggcatttcgttcgtgattgtcagcaagaaaatcaacactcgtttc
ttcttgaaaaggagagacgcgttcgggaatccaccgtgcgggacggtggtcgacaacacg
gtgacgctcagcgaacgcttcgatttcttcctggtgtcgcagaaagtcaatcagggtacg
atttcgccaatcaatttcaacgtcatctataattcgtccaacattacgccggatattcac
caatcgttggcctatgctttgactcacgtttacttcaattggccgggtacagtacgagtt
ccggctccaatccaatacgcccataaattagcgtatttgattggcgagagaactcagcgg
atgccgctagacaacttggcaaaatacccctattacttgtga
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