Daphnia pulicaria: 124314545
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Entry
124314545 CDS
T08670
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124314545
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124314545
piRNA pathway
124314545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoN
Motif
Other DBs
NCBI-GeneID:
124314545
NCBI-ProteinID:
XP_046635700
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Position
1:26629242..26633231
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AA seq
855 aa
AA seq
DB search
MADATRRAGGRGRSNAPPQQAPRRPGDNPPISQGIGRGAVRTAPQVTTAGPPVVTPAAIQ
TPGDVAGATAIESQRAPDREANRNIVTRPSPTFVKTGSGGAPLDVRSNYFQLIKKPDMHL
LQYRVDFTPEIDHPGVKKALIRVHEKTLGKYVFDGTLLYNTTRLAQPLELASRRTSDETD
VKITLDFKNEIQAGDPVYNSVMNLILRRCLANLNMVMIRRDYYDAAAREDVPGHPITIWP
GYLTAINHHEKDCLLNVEIVHKFLRRDSALDIMDRIRRSGSDGIKERITAELVGKIVMTG
YNNKTYRIDDVDFTQSASSTFHLRKEDRDISYINYYKERYQQTIKSVTQPLLVSKPTRRD
INRGNNENVYLVPELCGMTGLSQEQRANFNLTRAISTITRVAPDRRVETLMKFRRRLAET
PQIQQELNSWGIQFANDIVNCQARILPTKAILTGGKKIDVRDGDWSRSMHNTKMQVSVRL
DHWLVIHPNSMGQQVRSFVQLIKRVGGPQGFNVPEPDYISLEADRTTNYANALKNELPKK
SYDIVMCVLRTGREDIYSVIKNITFCQVGIASQVITGRILQGDERKQLSVATKVMTQIAC
KLGAEPWRVDVPNKPWMICGYDTYHDATQKRAVGAFVASVNPCYTRYNSSVKIHSANEEI
SPSFQDHMLTSLRAYYLANRTLPEKIIIYRDGVGAGDIVRLMETEVTAVKSACTEAGNRV
LSGKYTPGIAFVVVSKRINTRFFAGRKEKPENPPCGTVVDNTVTLTDRFDFFLVSQKVNQ
GTVSPTNFNIIFNSANFTPEIHQSMAYSLTQVYYNWPGTLRVPAPVQYAHKLAYLVGESI
RNLPRPELAKFPYYL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcaacaagaagagctggtggcagaggacgttcaaatgcaccgccacaacaa
gcgcccagacgaccaggagataatccgccaatttcccagggaattggacgtggagctgtg
cgaactgcaccacaggtgacaactgctggacctcctgttgtgactccagcagccattcaa
accccaggggatgtggcaggggcgacagccatcgaatcccaaagggcaccagaccgagaa
gccaaccggaatattgtcacaagaccctcgccgacattcgtcaaaactggatcgggagga
gctccgctggatgtgcgctccaattactttcagttgattaagaaaccggatatgcatctg
ttgcaatatcgagtcgatttcacaccggaaatcgatcaccctggtgtgaaaaaagctctc
attcgcgttcacgaaaaaaccctgggcaaatacgtgttcgacgggactctactctacaac
acgactcgtctggcccaaccgctggaattggcgtcgagacggacgtccgatgaaaccgac
gtcaaaataactttggattttaagaatgaaattcaggcgggcgatcctgtttacaacagc
gtcatgaatttgatcctgcgccgttgcctggccaatctcaacatggtcatgatccgacgc
gactattacgatgcagcagccagagaagacgttccgggtcacccgattaccatttggcct
ggatacctgacggctataaatcatcacgaaaaggattgtcttttgaatgtggaaatcgtc
cacaagttcctacgcagagacagcgcattagacattatggacaggattcgacgctcagga
tcggacggtatcaaggaacgaattacagccgagctggtgggcaaaatcgtgatgacgggc
tacaacaacaaaacgtacaggatcgacgacgtggatttcacgcaaagcgcttcgtccact
ttccatttgcgcaaagaggatcgggacataagttacatcaactattacaaagagcgttac
cagcagaccatcaaatccgtcacgcagccgctgctcgtgtcgaagccgacgcgtcgtgac
atcaaccgcggcaacaacgagaacgtctacctcgttccggaattgtgcggaatgacggga
ctctcgcaagagcaaagggctaactttaatttaacgcgggctatttcgacaatcactcga
gtggctcccgacagacgagtggagactttgatgaaattccgtcgccgattggcagaaact
ccgcagattcaacaagagctcaacagctggggaattcagtttgcaaatgacattgtcaac
tgtcaagccagaattttgccaacgaaagctattttgactggaggcaaaaagatcgacgtc
agagatggtgactggagccgcagtatgcataacacgaaaatgcaagtttccgtccggctg
gaccattggctcgtcattcatccaaacagcatgggccagcaagttcgatcctttgtccag
ctcatcaaaagagtcggtggtcctcaagggttcaatgtacccgaaccagactacattagt
ttagaggccgatcggacaaccaattacgccaacgcccttaagaacgaactgccgaaaaag
tcgtacgatatcgtcatgtgcgtactgcggacgggcagagaagacatttactctgtcatc
aaaaacatcaccttttgccaagtgggcattgcttcccaggttattaccgggagaattcta
caaggagatgagcggaaacaactgtcggtggccaccaaagtcatgacgcaaatcgcatgc
aaattaggtgctgaaccttggcgagtcgacgtgccaaacaagccgtggatgatttgcgga
tacgacacgtatcacgacgccactcagaaaagagccgtcggggcgttcgtcgcttccgtc
aatccgtgctacacgcgatacaattcgtccgtcaaaatccactcggccaacgaagagatt
tcgccgagtttccaggatcacatgctcacatcattgcgggcttactacctggcaaaccga
actctgccggagaagatcatcatttatcgcgatggcgtaggggccggcgatattgtccgc
ctcatggaaacggaagtcacagccgtcaagtcggcttgcaccgaagctggcaatagggtt
ttgtcgggcaagtacacgcccggcattgctttcgtggtcgttagcaaacgaatcaacacg
cgcttcttcgccggaaggaaagagaaaccggaaaatccaccatgcggaacggtggtggac
aacacggtgacgctcaccgaccgcttcgatttcttcctggtgtctcagaaagttaatcag
ggaacagtttcgcccaccaatttcaacatcatctttaattcggccaattttacgccggaa
atccatcaatccatggcttactctttgacgcaagtctactacaattggccgggcacatta
cgagttccggcgccagtccaatatgctcacaaattagcctatttggtgggggagagcatc
cgcaaccttccgagacccgaattggctaaattcccttactatctttaa
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