Daphnia pulicaria: 124314656
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Entry
124314656 CDS
T08670
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dpz
Daphnia pulicaria
Pathway
dpz04137
Mitophagy - animal
dpz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124314656
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124314656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124314656
03009 Ribosome biogenesis [BR:
dpz03009
]
124314656
04131 Membrane trafficking [BR:
dpz04131
]
124314656
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpz04147
]
124314656
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124314656
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124314656
Membrane trafficking [BR:
dpz04131
]
SNARE
SNARE associated proteins
Others
124314656
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124314656
Exosome [BR:
dpz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124314656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_33
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
AAA_28
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
ATPase_2
IstB_IS21
AAA_18
AAA_7
ABC_tran
Vps4_C
DUF815
TsaE
NB-ARC
NACHT
Viral_helicase1
bpMoxR
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
124314656
NCBI-ProteinID:
XP_046635874
LinkDB
All DBs
Position
10:7039490..7043311
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AA seq
802 aa
AA seq
DB search
MAEPKGNEDLSTAILKNKVKPNRLLVEEAVNDDNSVVAMSQEKMDELQLFKGDTVLLKGK
KRKETVCIVLSDESVSNEKIRMNRVVRNNLRVRLGDVVSVSPCPDVKYGKRIHVLPIDDT
VEGLTGSLFDVYLKPYFLEAYRPIHKGDIFIVRGGMRAVEFKVVETDPVPYCIVAPDTVI
HCEGEPIKREEEEEALNAVGYDDIGGVRKQLALIKEMVELPLRHPQLFKAIGVKPPRGIL
LFGPPGTGKTLIARAVANETGAFFYLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIF
IDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDAALRRFGR
FDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEQVAAETHGHVGADIAALCSEAALQQ
IREKMDLIDLEEDQIDAEVLASLAVTMENFRFAMGKSTPSALRETIVEVPNVSWEDIGGL
EGVKRELQELVQYPVEHPEKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFISI
KGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSSGDAGGAADRVIN
QVLTEMDGMGAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEKSREAILKSNLR
KSPLAPDVDLIYMAKVTHGFSGADLTEICQRACKLAIRQSIEAEIRREKERAANPDMDME
MEEEDPVPQILRSHFEDAMKFARRSVSDNDIRKYEMFSQTLQQSRGFGTNFRFPNAPAAG
GSQPSGGSGGNFQDDADDDLYS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccgaaagggaatgaagatttgtcgacagctattttgaagaataaggtgaag
ccgaataggcttctagtcgaggaggctgtaaatgatgacaactctgttgttgccatgtcc
caggaaaaaatggatgagctacagctcttcaaaggtgacacagttctacttaaggggaag
aaaaggaaagaaactgtgtgcattgtcttgtctgatgagtctgtatcaaatgaaaagatc
aggatgaatcgtgttgtcagaaacaacctgcgtgtcaggttgggagatgtagtgtcggtt
tccccatgccctgatgtgaagtacggcaaacgaatccatgttctgccaattgatgataca
gtggagggactcacaggaagtctctttgatgtgtacctgaagccatactttttggaagca
tatcgtccaattcataaaggcgacatatttattgtccgcggaggaatgcgtgcagtggag
tttaaagtggttgaaacggaccctgttccctattgcatcgtcgctccagacacagtcatt
cattgtgagggtgaaccaatcaaacgagaggaagaggaggaggctttgaatgctgtcggt
tacgacgacattggaggtgttcgtaagcaattggctctcattaaagagatggtagaattg
cctttgcgtcatccccagcttttcaaagcgattggtgtgaagccaccccgtggtattcta
ctctttggacctcctggtaccggtaaaacacttatcgctcgtgctgtagccaatgagacc
ggagctttcttctacttgatcaatggtcctgaaattatgagcaagttggctggcgagtcc
gaaagtaatctacgtaaagcatttgaagaagccgagaaaaactcacctgctatcatcttc
attgatgagttggacgccattgctcctaagcgtgaaaagacccatggtgaagtagaacgc
cgtatcgtctcccagttgttgacgcttatggatggcttgaaacagcgatcacatgtaatt
gttatggctgccaccaaccgacccaattcgattgatgctgcccttcgtcgattcggacgc
tttgatcgcgaagttgatatcggtattccagatgccactgggcgattggaagtcctgcgt
attcacaccaagaatatgaaactggccgatgatgtcgatttggaacaagttgccgccgaa
acacacggccacgttggtgccgatattgctgcattgtgctcagaagctgcactccaacag
atccgagagaaaatggatcttattgacttggaagaggaccaaatcgacgctgaagtcctg
gcatccctggccgttactatggagaacttccggttcgctatgggcaaatcaacgcctagt
gccttacgagagaccattgtagaggtgcccaacgtttcatgggaagacattggtggtttg
gaaggcgtcaaacgcgagcttcaagagttggtccaatacccggttgaacatccagagaaa
ttcctcaagttcggcatgaccccttctcgtggtgttctcttctatggcccacccggttgc
ggtaaaacgctgttggctaaggctattgccaacgagtgccaggccaatttcatttctatc
aaaggtcccgagttgttgaccatgtggtttggtgagtctgaagccaacgtgcgagacgtt
ttcgacaaggcacgtgctgctgctccttgcgtcttgttcttcgacgaactcgattccatt
gctaaagctcgtggtggaagctctggtgacgctggaggagctgccgatcgtgtcatcaac
caagttttgacagagatggacggtatgggtgctaagaaaaacgtctttatcattggagcg
acgaatcgtcctgatatcattgatccggctgtattacgtcctggtcgtttggatcaattg
atttacatccctctacctgatgagaagtcacgggaagccattttaaagtctaatcttcga
aagtcccctcttgctccggatgtggatttgatctatatggctaaagttacgcacggtttc
tctggtgccgatttgactgaaatttgccaacgtgcatgcaagttggctattcgccagtct
atcgaagccgaaatcagaagggagaaagaacgcgccgccaatcctgatatggatatggaa
atggaagaggaagatccagttccccagattctgaggtcgcattttgaagatgccatgaag
tttgctcgtcgttctgtttcagacaacgatatccgcaaatacgagatgttctcacagact
ttgcagcaatcacgtggttttggcactaatttcagattcccgaatgcaccagctgcaggt
ggcagtcagcctagcggaggatctggaggcaacttccaagatgatgcggatgatgatcta
tatagttaa
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integrated database retrieval system
